Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC096631.2-201ENST00000436136 790 ntBASIC18.47■□□□□ 0.55
LINC01006Q8NI28 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01006Q8NI28 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 AL512631.2-201ENST00000604634 923 ntBASIC18.46■□□□□ 0.55
LINC01006Q8NI28 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01006Q8NI28 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01006Q8NI28 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC01006Q8NI28 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01006Q8NI28 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01006Q8NI28 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01006Q8NI28 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 AC090877.2-201ENST00000558441 1738 ntBASIC18.44■□□□□ 0.54
LINC01006Q8NI28 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01006Q8NI28 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 AC005837.3-201ENST00000612163 286 ntBASIC18.43■□□□□ 0.54
LINC01006Q8NI28 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.43■□□□□ 0.54
LINC01006Q8NI28 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.42■□□□□ 0.54
LINC01006Q8NI28 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC01006Q8NI28 SNX5-217ENST00000606557 1087 ntBASIC18.41■□□□□ 0.54
LINC01006Q8NI28 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.41■□□□□ 0.54
LINC01006Q8NI28 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01006Q8NI28 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LINC01006Q8NI28 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01006Q8NI28 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 MIR6722-201ENST00000617286 78 ntBASIC18.4■□□□□ 0.54
LINC01006Q8NI28 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01006Q8NI28 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01006Q8NI28 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01006Q8NI28 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC01006Q8NI28 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LINC01006Q8NI28 AC133561.4-201ENST00000566112 224 ntBASIC18.39■□□□□ 0.53
LINC01006Q8NI28 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01006Q8NI28 AC097639.1-201ENST00000565519 1891 ntBASIC18.39■□□□□ 0.53
LINC01006Q8NI28 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01006Q8NI28 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01006Q8NI28 AC096887.2-201ENST00000623443 1957 ntBASIC18.37■□□□□ 0.53
LINC01006Q8NI28 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01006Q8NI28 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 ERN1-208ENST00000606895 2068 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms