Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC33.09■■■□□ 2.89
ARHGEF28Q8N1W1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC33.09■■■□□ 2.89
ARHGEF28Q8N1W1 AC010997.5-201ENST00000609182 354 ntBASIC33.09■■■□□ 2.89
ARHGEF28Q8N1W1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC33.09■■■□□ 2.89
ARHGEF28Q8N1W1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC33.08■■■□□ 2.89
ARHGEF28Q8N1W1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC33.08■■■□□ 2.89
ARHGEF28Q8N1W1 SRR-208ENST00000576848 588 ntTSL 4 BASIC33.08■■■□□ 2.89
ARHGEF28Q8N1W1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ARHGEF28Q8N1W1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
ARHGEF28Q8N1W1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
ARHGEF28Q8N1W1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
ARHGEF28Q8N1W1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
ARHGEF28Q8N1W1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
ARHGEF28Q8N1W1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
ARHGEF28Q8N1W1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
ARHGEF28Q8N1W1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARHGEF28Q8N1W1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ARHGEF28Q8N1W1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
ARHGEF28Q8N1W1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC33.04■■■□□ 2.88
ARHGEF28Q8N1W1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC33.04■■■□□ 2.88
ARHGEF28Q8N1W1 MIR4466-201ENST00000606121 54 ntBASIC33.04■■■□□ 2.88
ARHGEF28Q8N1W1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ARHGEF28Q8N1W1 MIR3621-201ENST00000580529 85 ntBASIC33.03■■■□□ 2.88
ARHGEF28Q8N1W1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
ARHGEF28Q8N1W1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ARHGEF28Q8N1W1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 CD72-202ENST00000378430 585 ntTSL 3 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 RASSF1-AS1-201ENST00000629828 790 ntBASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 AL121749.1-202ENST00000609313 2153 ntBASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
ARHGEF28Q8N1W1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC33.01■■■□□ 2.87
ARHGEF28Q8N1W1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ARHGEF28Q8N1W1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC33.01■■■□□ 2.87
ARHGEF28Q8N1W1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC33.01■■■□□ 2.87
ARHGEF28Q8N1W1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC33.01■■■□□ 2.87
ARHGEF28Q8N1W1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ARHGEF28Q8N1W1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC33■■■□□ 2.87
ARHGEF28Q8N1W1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC33■■■□□ 2.87
ARHGEF28Q8N1W1 MIR638-201ENST00000385237 100 ntBASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 AC092803.2-201ENST00000564287 1899 ntBASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.99■■■□□ 2.87
ARHGEF28Q8N1W1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
ARHGEF28Q8N1W1 AC090877.2-201ENST00000558441 1738 ntBASIC32.98■■■□□ 2.87
ARHGEF28Q8N1W1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.98■■■□□ 2.87
ARHGEF28Q8N1W1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC32.98■■■□□ 2.87
ARHGEF28Q8N1W1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
ARHGEF28Q8N1W1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
ARHGEF28Q8N1W1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
ARHGEF28Q8N1W1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC32.95■■■□□ 2.87
ARHGEF28Q8N1W1 AL136116.3-201ENST00000402907 1138 ntBASIC32.95■■■□□ 2.87
ARHGEF28Q8N1W1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC32.95■■■□□ 2.87
ARHGEF28Q8N1W1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.95■■■□□ 2.86
ARHGEF28Q8N1W1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.86
ARHGEF28Q8N1W1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
ARHGEF28Q8N1W1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.94■■■□□ 2.86
ARHGEF28Q8N1W1 AC110285.6-201ENST00000617652 491 ntBASIC32.94■■■□□ 2.86
ARHGEF28Q8N1W1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
ARHGEF28Q8N1W1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
ARHGEF28Q8N1W1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms