Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.51■■□□□ 1.35
TMEFF1Q8IYR6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TMEFF1Q8IYR6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 AC133561.4-201ENST00000566112 224 ntBASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMEFF1Q8IYR6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMEFF1Q8IYR6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEFF1Q8IYR6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.49■■□□□ 1.35
TMEFF1Q8IYR6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMEFF1Q8IYR6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEFF1Q8IYR6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEFF1Q8IYR6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.47■■□□□ 1.35
TMEFF1Q8IYR6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMEFF1Q8IYR6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.47■■□□□ 1.35
TMEFF1Q8IYR6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.47■■□□□ 1.35
TMEFF1Q8IYR6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMEFF1Q8IYR6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TMEFF1Q8IYR6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEFF1Q8IYR6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TMEFF1Q8IYR6 PBX2P1-201ENST00000493219 1291 ntBASIC23.46■■□□□ 1.35
TMEFF1Q8IYR6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEFF1Q8IYR6 FOXO3B-201ENST00000395675 1928 ntBASIC23.45■■□□□ 1.35
TMEFF1Q8IYR6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.45■■□□□ 1.34
TMEFF1Q8IYR6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TMEFF1Q8IYR6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEFF1Q8IYR6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
TMEFF1Q8IYR6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
TMEFF1Q8IYR6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TMEFF1Q8IYR6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.43■■□□□ 1.34
TMEFF1Q8IYR6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.43■■□□□ 1.34
TMEFF1Q8IYR6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.43■■□□□ 1.34
TMEFF1Q8IYR6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.43■■□□□ 1.34
TMEFF1Q8IYR6 ZNRF2P3-201ENST00000424200 374 ntBASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 AC106739.1-201ENST00000617035 715 ntBASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TMEFF1Q8IYR6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.41■■□□□ 1.34
TMEFF1Q8IYR6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 AC142381.2-201ENST00000566120 298 ntBASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TMEFF1Q8IYR6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TMEFF1Q8IYR6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TMEFF1Q8IYR6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.39■■□□□ 1.34
TMEFF1Q8IYR6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEFF1Q8IYR6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 UNC93B3-201ENST00000308076 687 ntBASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 SNX5-217ENST00000606557 1087 ntBASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEFF1Q8IYR6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEFF1Q8IYR6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEFF1Q8IYR6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.37■■□□□ 1.33
TMEFF1Q8IYR6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEFF1Q8IYR6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEFF1Q8IYR6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TMEFF1Q8IYR6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms