Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC142381.3-201ENST00000568208 1670 ntBASIC21.05■□□□□ 0.96
H3F3AP84243 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3F3AP84243 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
H3F3AP84243 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3AP84243 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.04■□□□□ 0.96
H3F3AP84243 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3AP84243 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
H3F3AP84243 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.04■□□□□ 0.96
H3F3AP84243 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3AP84243 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3F3AP84243 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3AP84243 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.03■□□□□ 0.96
H3F3AP84243 MIR4508-201ENST00000584178 70 ntBASIC21.03■□□□□ 0.96
H3F3AP84243 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3AP84243 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3AP84243 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3AP84243 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3F3AP84243 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
H3F3AP84243 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.02■□□□□ 0.96
H3F3AP84243 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.02■□□□□ 0.96
H3F3AP84243 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.02■□□□□ 0.96
H3F3AP84243 MIR6089-201ENST00000616698 64 ntBASIC21.02■□□□□ 0.96
H3F3AP84243 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3F3AP84243 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
H3F3AP84243 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
H3F3AP84243 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.01■□□□□ 0.95
H3F3AP84243 AC103834.1-201ENST00000520383 144 ntBASIC21.01■□□□□ 0.95
H3F3AP84243 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.01■□□□□ 0.95
H3F3AP84243 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21■□□□□ 0.95
H3F3AP84243 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
H3F3AP84243 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
H3F3AP84243 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3F3AP84243 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21■□□□□ 0.95
H3F3AP84243 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21■□□□□ 0.95
H3F3AP84243 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
H3F3AP84243 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3F3AP84243 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21■□□□□ 0.95
H3F3AP84243 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
H3F3AP84243 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
H3F3AP84243 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
H3F3AP84243 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.99■□□□□ 0.95
H3F3AP84243 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
H3F3AP84243 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.99■□□□□ 0.95
H3F3AP84243 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3F3AP84243 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.99■□□□□ 0.95
H3F3AP84243 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
H3F3AP84243 AC138932.3-201ENST00000567634 1902 ntBASIC20.98■□□□□ 0.95
H3F3AP84243 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.98■□□□□ 0.95
H3F3AP84243 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.98■□□□□ 0.95
H3F3AP84243 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3F3AP84243 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.98■□□□□ 0.95
H3F3AP84243 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.97■□□□□ 0.95
H3F3AP84243 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.97■□□□□ 0.95
H3F3AP84243 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3AP84243 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3AP84243 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.97■□□□□ 0.95
H3F3AP84243 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3AP84243 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3AP84243 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.96■□□□□ 0.95
H3F3AP84243 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
H3F3AP84243 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
H3F3AP84243 AP003733.4-201ENST00000623785 1697 ntBASIC20.96■□□□□ 0.95
H3F3AP84243 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
H3F3AP84243 AC090877.2-201ENST00000558441 1738 ntBASIC20.96■□□□□ 0.95
H3F3AP84243 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.96■□□□□ 0.95
H3F3AP84243 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.96■□□□□ 0.95
H3F3AP84243 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
H3F3AP84243 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3AP84243 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
H3F3AP84243 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
H3F3AP84243 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
H3F3AP84243 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3AP84243 KRT18P24-201ENST00000344739 1156 ntBASIC20.95■□□□□ 0.94
H3F3AP84243 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.95■□□□□ 0.94
H3F3AP84243 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3AP84243 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.95■□□□□ 0.94
H3F3AP84243 AC011551.1-201ENST00000614101 683 ntBASIC20.95■□□□□ 0.94
H3F3AP84243 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3AP84243 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3AP84243 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3AP84243 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3AP84243 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3AP84243 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3AP84243 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3AP84243 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.94■□□□□ 0.94
H3F3AP84243 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.94■□□□□ 0.94
H3F3AP84243 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
H3F3AP84243 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
H3F3AP84243 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3AP84243 YBX1P4-201ENST00000392794 808 ntBASIC20.93■□□□□ 0.94
H3F3AP84243 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3AP84243 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.93■□□□□ 0.94
H3F3AP84243 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3AP84243 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms