Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPL39P62891 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.51■□□□□ 0.23
RPL39P62891 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.51■□□□□ 0.23
RPL39P62891 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL39P62891 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RPL39P62891 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.51■□□□□ 0.23
RPL39P62891 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL39P62891 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPL39P62891 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.51■□□□□ 0.23
RPL39P62891 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.5■□□□□ 0.23
RPL39P62891 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L13-201ENST00000554103 1267 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L15-201ENST00000611059 1267 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L23-201ENST00000615195 1269 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L24-201ENST00000617576 1269 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L22-201ENST00000618238 1269 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L20-201ENST00000619712 1269 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L21-201ENST00000622058 1269 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L10-201ENST00000622460 1267 ntBASIC16.5■□□□□ 0.23
RPL39P62891 DUX4L25-201ENST00000624915 1269 ntBASIC16.5■□□□□ 0.23
RPL39P62891 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RPL39P62891 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPL39P62891 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPL39P62891 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPL39P62891 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.5■□□□□ 0.23
RPL39P62891 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 LINC01971-201ENST00000617888 1048 ntBASIC16.49■□□□□ 0.23
RPL39P62891 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.49■□□□□ 0.23
RPL39P62891 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL39P62891 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
RPL39P62891 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.48■□□□□ 0.23
RPL39P62891 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
RPL39P62891 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL39P62891 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.48■□□□□ 0.23
RPL39P62891 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 HLA-V-202ENST00000446817 847 ntBASIC16.47■□□□□ 0.23
RPL39P62891 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RPL39P62891 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.47■□□□□ 0.23
RPL39P62891 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.47■□□□□ 0.23
RPL39P62891 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.47■□□□□ 0.23
RPL39P62891 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
RPL39P62891 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.47■□□□□ 0.23
RPL39P62891 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.47■□□□□ 0.23
RPL39P62891 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.47■□□□□ 0.23
RPL39P62891 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.47■□□□□ 0.23
RPL39P62891 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.47■□□□□ 0.23
RPL39P62891 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.47■□□□□ 0.23
RPL39P62891 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPL39P62891 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.46■□□□□ 0.23
RPL39P62891 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPL39P62891 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPL39P62891 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPL39P62891 CLDN5-201ENST00000403084 2357 ntBASIC16.46■□□□□ 0.23
RPL39P62891 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPL39P62891 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RPL39P62891 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPL39P62891 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RPL39P62891 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.45■□□□□ 0.22
RPL39P62891 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RPL39P62891 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RPL39P62891 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RPL39P62891 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.45■□□□□ 0.22
RPL39P62891 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.45■□□□□ 0.22
RPL39P62891 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.45■□□□□ 0.22
RPL39P62891 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPL39P62891 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPL39P62891 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPL39P62891 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPL39P62891 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RPL39P62891 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPL39P62891 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPL39P62891 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPL39P62891 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPL39P62891 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.44■□□□□ 0.22
RPL39P62891 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPL39P62891 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.44■□□□□ 0.22
RPL39P62891 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms