Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SRP54P61011 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SRP54P61011 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SRP54P61011 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.18■■□□□ 1.3
SRP54P61011 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SRP54P61011 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SRP54P61011 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SRP54P61011 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SRP54P61011 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SRP54P61011 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SRP54P61011 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.17■■□□□ 1.3
SRP54P61011 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.17■■□□□ 1.3
SRP54P61011 TSPY9P-201ENST00000440215 945 ntBASIC23.17■■□□□ 1.3
SRP54P61011 TSPY11P-201ENST00000442607 1045 ntBASIC23.17■■□□□ 1.3
SRP54P61011 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.17■■□□□ 1.3
SRP54P61011 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.17■■□□□ 1.3
SRP54P61011 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SRP54P61011 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SRP54P61011 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SRP54P61011 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SRP54P61011 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.16■■□□□ 1.3
SRP54P61011 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SRP54P61011 AC092028.1-203ENST00000608262 953 ntBASIC23.16■■□□□ 1.3
SRP54P61011 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.16■■□□□ 1.3
SRP54P61011 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.16■■□□□ 1.3
SRP54P61011 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SRP54P61011 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SRP54P61011 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SRP54P61011 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SRP54P61011 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
SRP54P61011 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.15■■□□□ 1.3
SRP54P61011 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
SRP54P61011 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.15■■□□□ 1.3
SRP54P61011 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SRP54P61011 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
SRP54P61011 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SRP54P61011 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.14■■□□□ 1.3
SRP54P61011 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SRP54P61011 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.14■■□□□ 1.29
SRP54P61011 KRT16P3-201ENST00000439127 1283 ntBASIC23.14■■□□□ 1.29
SRP54P61011 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.14■■□□□ 1.29
SRP54P61011 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SRP54P61011 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SRP54P61011 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.13■■□□□ 1.29
SRP54P61011 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.13■■□□□ 1.29
SRP54P61011 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.13■■□□□ 1.29
SRP54P61011 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SRP54P61011 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.13■■□□□ 1.29
SRP54P61011 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SRP54P61011 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SRP54P61011 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SRP54P61011 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.12■■□□□ 1.29
SRP54P61011 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SRP54P61011 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.12■■□□□ 1.29
SRP54P61011 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SRP54P61011 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
SRP54P61011 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.12■■□□□ 1.29
SRP54P61011 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SRP54P61011 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SRP54P61011 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRP54P61011 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.11■■□□□ 1.29
SRP54P61011 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SRP54P61011 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.11■■□□□ 1.29
SRP54P61011 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SRP54P61011 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRP54P61011 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SRP54P61011 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRP54P61011 AC090877.2-201ENST00000558441 1738 ntBASIC23.11■■□□□ 1.29
SRP54P61011 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SRP54P61011 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.09■■□□□ 1.29
SRP54P61011 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SRP54P61011 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SRP54P61011 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SRP54P61011 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SRP54P61011 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.09■■□□□ 1.29
SRP54P61011 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SRP54P61011 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SRP54P61011 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.08■■□□□ 1.29
SRP54P61011 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SRP54P61011 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SRP54P61011 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.08■■□□□ 1.29
SRP54P61011 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SRP54P61011 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.08■■□□□ 1.29
SRP54P61011 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.08■■□□□ 1.29
SRP54P61011 AF131216.4-201ENST00000638924 1588 ntBASIC23.08■■□□□ 1.29
SRP54P61011 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SRP54P61011 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SRP54P61011 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SRP54P61011 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.07■■□□□ 1.28
SRP54P61011 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.07■■□□□ 1.28
SRP54P61011 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SRP54P61011 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.07■■□□□ 1.28
SRP54P61011 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SRP54P61011 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.07■■□□□ 1.28
SRP54P61011 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SRP54P61011 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.07■■□□□ 1.28
SRP54P61011 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.06■■□□□ 1.28
SRP54P61011 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRP54P61011 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.06■■□□□ 1.28
SRP54P61011 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms