Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.76■■□□□ 1.39
WNT3AP56704 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
WNT3AP56704 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.76■■□□□ 1.39
WNT3AP56704 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
WNT3AP56704 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
WNT3AP56704 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
WNT3AP56704 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
WNT3AP56704 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.75■■□□□ 1.39
WNT3AP56704 BHLHE23-202ENST00000612929 1109 ntBASIC23.75■■□□□ 1.39
WNT3AP56704 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
WNT3AP56704 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.75■■□□□ 1.39
WNT3AP56704 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
WNT3AP56704 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
WNT3AP56704 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
WNT3AP56704 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.74■■□□□ 1.39
WNT3AP56704 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.74■■□□□ 1.39
WNT3AP56704 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.74■■□□□ 1.39
WNT3AP56704 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.74■■□□□ 1.39
WNT3AP56704 AL592295.1-201ENST00000400984 884 ntBASIC23.74■■□□□ 1.39
WNT3AP56704 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 AL033527.3-201ENST00000566366 1196 ntBASIC23.74■■□□□ 1.39
WNT3AP56704 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 AL139125.2-201ENST00000623134 1869 ntBASIC23.74■■□□□ 1.39
WNT3AP56704 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
WNT3AP56704 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
WNT3AP56704 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
WNT3AP56704 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
WNT3AP56704 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.73■■□□□ 1.39
WNT3AP56704 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
WNT3AP56704 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
WNT3AP56704 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.73■■□□□ 1.39
WNT3AP56704 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.72■■□□□ 1.39
WNT3AP56704 AC019171.1-201ENST00000601251 1056 ntBASIC23.72■■□□□ 1.39
WNT3AP56704 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
WNT3AP56704 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.72■■□□□ 1.39
WNT3AP56704 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.72■■□□□ 1.39
WNT3AP56704 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
WNT3AP56704 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
WNT3AP56704 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
WNT3AP56704 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
WNT3AP56704 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.71■■□□□ 1.39
WNT3AP56704 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.7■■□□□ 1.38
WNT3AP56704 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
WNT3AP56704 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.7■■□□□ 1.38
WNT3AP56704 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
WNT3AP56704 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.7■■□□□ 1.38
WNT3AP56704 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
WNT3AP56704 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
WNT3AP56704 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
WNT3AP56704 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
WNT3AP56704 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
WNT3AP56704 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
WNT3AP56704 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.69■■□□□ 1.38
WNT3AP56704 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
WNT3AP56704 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
WNT3AP56704 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.69■■□□□ 1.38
WNT3AP56704 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.69■■□□□ 1.38
WNT3AP56704 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.69■■□□□ 1.38
WNT3AP56704 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
WNT3AP56704 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
WNT3AP56704 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.68■■□□□ 1.38
WNT3AP56704 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
WNT3AP56704 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
WNT3AP56704 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
WNT3AP56704 AC010980.1-201ENST00000587192 1142 ntBASIC23.68■■□□□ 1.38
WNT3AP56704 PVT1_1.1-201ENST00000615125 194 ntBASIC23.68■■□□□ 1.38
WNT3AP56704 AC074183.2-201ENST00000623112 922 ntBASIC23.68■■□□□ 1.38
WNT3AP56704 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
WNT3AP56704 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
WNT3AP56704 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
WNT3AP56704 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
WNT3AP56704 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3AP56704 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3AP56704 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3AP56704 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.66■■□□□ 1.38
WNT3AP56704 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
WNT3AP56704 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
WNT3AP56704 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.66■■□□□ 1.38
WNT3AP56704 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.66■■□□□ 1.38
WNT3AP56704 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.66■■□□□ 1.38
WNT3AP56704 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.66■■□□□ 1.38
WNT3AP56704 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3AP56704 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
WNT3AP56704 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
WNT3AP56704 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
WNT3AP56704 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.65■■□□□ 1.38
WNT3AP56704 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms