Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMC4P56277 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
CMC4P56277 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMC4P56277 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CMC4P56277 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMC4P56277 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CMC4P56277 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMC4P56277 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMC4P56277 AC090877.2-201ENST00000558441 1738 ntBASIC17.48■□□□□ 0.39
CMC4P56277 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMC4P56277 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMC4P56277 AC103834.1-201ENST00000520383 144 ntBASIC17.48■□□□□ 0.39
CMC4P56277 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CMC4P56277 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CMC4P56277 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.48■□□□□ 0.39
CMC4P56277 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.48■□□□□ 0.39
CMC4P56277 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.48■□□□□ 0.39
CMC4P56277 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.47■□□□□ 0.39
CMC4P56277 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMC4P56277 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMC4P56277 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.47■□□□□ 0.39
CMC4P56277 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CMC4P56277 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CMC4P56277 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMC4P56277 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMC4P56277 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.46■□□□□ 0.39
CMC4P56277 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMC4P56277 RARRES2P1-201ENST00000474487 481 ntBASIC17.46■□□□□ 0.39
CMC4P56277 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.46■□□□□ 0.39
CMC4P56277 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMC4P56277 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.46■□□□□ 0.39
CMC4P56277 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.46■□□□□ 0.39
CMC4P56277 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMC4P56277 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CMC4P56277 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 AC120024.1-201ENST00000562672 995 ntBASIC17.45■□□□□ 0.38
CMC4P56277 AC103724.3-201ENST00000564481 992 ntBASIC17.45■□□□□ 0.38
CMC4P56277 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.45■□□□□ 0.38
CMC4P56277 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMC4P56277 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMC4P56277 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMC4P56277 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMC4P56277 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.44■□□□□ 0.38
CMC4P56277 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.44■□□□□ 0.38
CMC4P56277 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CMC4P56277 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMC4P56277 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
CMC4P56277 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMC4P56277 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMC4P56277 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.43■□□□□ 0.38
CMC4P56277 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMC4P56277 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.43■□□□□ 0.38
CMC4P56277 MIR6089-201ENST00000616698 64 ntBASIC17.43■□□□□ 0.38
CMC4P56277 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMC4P56277 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.43■□□□□ 0.38
CMC4P56277 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMC4P56277 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMC4P56277 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CMC4P56277 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMC4P56277 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMC4P56277 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CMC4P56277 SLC6A10P-202ENST00000431994 2058 ntBASIC17.42■□□□□ 0.38
CMC4P56277 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CMC4P56277 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CMC4P56277 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMC4P56277 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CMC4P56277 AP003733.4-201ENST00000623785 1697 ntBASIC17.42■□□□□ 0.38
CMC4P56277 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.41■□□□□ 0.38
CMC4P56277 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
CMC4P56277 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMC4P56277 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMC4P56277 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMC4P56277 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.41■□□□□ 0.38
CMC4P56277 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMC4P56277 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CMC4P56277 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CMC4P56277 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CMC4P56277 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMC4P56277 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMC4P56277 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMC4P56277 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMC4P56277 BX664725.1-201ENST00000438252 379 ntBASIC17.4■□□□□ 0.38
CMC4P56277 Z92544.1-202ENST00000571933 1220 ntBASIC17.4■□□□□ 0.38
CMC4P56277 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMC4P56277 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.4■□□□□ 0.38
CMC4P56277 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CMC4P56277 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMC4P56277 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.39■□□□□ 0.37
CMC4P56277 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CMC4P56277 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMC4P56277 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMC4P56277 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CMC4P56277 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMC4P56277 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms