Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GKN3PP0CG01 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GKN3PP0CG01 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GKN3PP0CG01 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GKN3PP0CG01 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GKN3PP0CG01 DUX4L9-201ENST00000449051 1259 ntBASIC21.55■■□□□ 1.04
GKN3PP0CG01 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GKN3PP0CG01 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.55■■□□□ 1.04
GKN3PP0CG01 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GKN3PP0CG01 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 RPS2P7-201ENST00000447334 885 ntBASIC21.54■■□□□ 1.04
GKN3PP0CG01 MIR6089-201ENST00000616698 64 ntBASIC21.54■■□□□ 1.04
GKN3PP0CG01 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GKN3PP0CG01 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.54■■□□□ 1.04
GKN3PP0CG01 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GKN3PP0CG01 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GKN3PP0CG01 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.53■■□□□ 1.04
GKN3PP0CG01 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.52■■□□□ 1.04
GKN3PP0CG01 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
GKN3PP0CG01 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GKN3PP0CG01 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GKN3PP0CG01 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.52■■□□□ 1.04
GKN3PP0CG01 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GKN3PP0CG01 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
GKN3PP0CG01 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.52■■□□□ 1.04
GKN3PP0CG01 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.52■■□□□ 1.04
GKN3PP0CG01 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.52■■□□□ 1.04
GKN3PP0CG01 MIR6765-201ENST00000614092 87 ntBASIC21.52■■□□□ 1.04
GKN3PP0CG01 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GKN3PP0CG01 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GKN3PP0CG01 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.52■■□□□ 1.03
GKN3PP0CG01 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GKN3PP0CG01 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GKN3PP0CG01 KRT18P60-201ENST00000312876 1297 ntBASIC21.51■■□□□ 1.03
GKN3PP0CG01 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
GKN3PP0CG01 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GKN3PP0CG01 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.51■■□□□ 1.03
GKN3PP0CG01 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.51■■□□□ 1.03
GKN3PP0CG01 AC129492.7-201ENST00000622992 756 ntBASIC21.51■■□□□ 1.03
GKN3PP0CG01 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GKN3PP0CG01 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.51■■□□□ 1.03
GKN3PP0CG01 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.51■■□□□ 1.03
GKN3PP0CG01 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GKN3PP0CG01 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.51■■□□□ 1.03
GKN3PP0CG01 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GKN3PP0CG01 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GKN3PP0CG01 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.5■■□□□ 1.03
GKN3PP0CG01 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GKN3PP0CG01 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GKN3PP0CG01 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GKN3PP0CG01 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GKN3PP0CG01 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GKN3PP0CG01 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.49■■□□□ 1.03
GKN3PP0CG01 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
GKN3PP0CG01 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GKN3PP0CG01 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GKN3PP0CG01 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GKN3PP0CG01 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GKN3PP0CG01 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GKN3PP0CG01 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GKN3PP0CG01 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.48■■□□□ 1.03
GKN3PP0CG01 ABHD17AP5-201ENST00000580133 923 ntBASIC21.48■■□□□ 1.03
GKN3PP0CG01 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
GKN3PP0CG01 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GKN3PP0CG01 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 AC087393.1-201ENST00000582896 145 ntBASIC21.47■■□□□ 1.03
GKN3PP0CG01 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GKN3PP0CG01 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
GKN3PP0CG01 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GKN3PP0CG01 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
GKN3PP0CG01 LINC00543-201ENST00000567234 1845 ntBASIC21.46■■□□□ 1.03
GKN3PP0CG01 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
GKN3PP0CG01 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms