Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.81■■□□□ 1.56
BEST1O76090 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
BEST1O76090 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.8■■□□□ 1.56
BEST1O76090 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BEST1O76090 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BEST1O76090 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
BEST1O76090 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.8■■□□□ 1.56
BEST1O76090 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.8■■□□□ 1.56
BEST1O76090 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
BEST1O76090 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BEST1O76090 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.8■■□□□ 1.56
BEST1O76090 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
BEST1O76090 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.79■■□□□ 1.56
BEST1O76090 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.79■■□□□ 1.56
BEST1O76090 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
BEST1O76090 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.79■■□□□ 1.56
BEST1O76090 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BEST1O76090 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BEST1O76090 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BEST1O76090 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BEST1O76090 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.79■■□□□ 1.56
BEST1O76090 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.78■■□□□ 1.56
BEST1O76090 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BEST1O76090 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BEST1O76090 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.78■■□□□ 1.56
BEST1O76090 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.78■■□□□ 1.56
BEST1O76090 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
BEST1O76090 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BEST1O76090 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
BEST1O76090 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BEST1O76090 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BEST1O76090 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.78■■□□□ 1.56
BEST1O76090 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.77■■□□□ 1.56
BEST1O76090 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BEST1O76090 MIR4281-201ENST00000580852 62 ntBASIC24.77■■□□□ 1.56
BEST1O76090 AC011551.1-201ENST00000614101 683 ntBASIC24.77■■□□□ 1.56
BEST1O76090 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.77■■□□□ 1.56
BEST1O76090 AC090877.2-201ENST00000558441 1738 ntBASIC24.77■■□□□ 1.56
BEST1O76090 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BEST1O76090 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
BEST1O76090 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
BEST1O76090 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BEST1O76090 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
BEST1O76090 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.76■■□□□ 1.55
BEST1O76090 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BEST1O76090 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BEST1O76090 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
BEST1O76090 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.75■■□□□ 1.55
BEST1O76090 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BEST1O76090 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BEST1O76090 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BEST1O76090 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
BEST1O76090 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BEST1O76090 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BEST1O76090 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
BEST1O76090 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BEST1O76090 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
BEST1O76090 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
BEST1O76090 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.74■■□□□ 1.55
BEST1O76090 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
BEST1O76090 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.74■■□□□ 1.55
BEST1O76090 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.74■■□□□ 1.55
BEST1O76090 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
BEST1O76090 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.74■■□□□ 1.55
BEST1O76090 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.73■■□□□ 1.55
BEST1O76090 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BEST1O76090 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BEST1O76090 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BEST1O76090 AC020928.2-201ENST00000588717 2197 ntBASIC24.73■■□□□ 1.55
BEST1O76090 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
BEST1O76090 AC239859.2-201ENST00000444165 318 ntBASIC24.72■■□□□ 1.55
BEST1O76090 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.72■■□□□ 1.55
BEST1O76090 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BEST1O76090 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
BEST1O76090 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.71■■□□□ 1.55
BEST1O76090 AC137630.3-201ENST00000607245 391 ntBASIC24.71■■□□□ 1.55
BEST1O76090 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BEST1O76090 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
BEST1O76090 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
BEST1O76090 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BEST1O76090 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
BEST1O76090 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.7■■□□□ 1.55
BEST1O76090 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.7■■□□□ 1.55
BEST1O76090 AC022211.4-201ENST00000625094 2161 ntBASIC24.7■■□□□ 1.55
BEST1O76090 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BEST1O76090 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
BEST1O76090 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
BEST1O76090 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.7■■□□□ 1.54
BEST1O76090 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
BEST1O76090 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BEST1O76090 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
BEST1O76090 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.69■■□□□ 1.54
BEST1O76090 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BEST1O76090 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms