Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCRL2O00421 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCRL2O00421 AL117328.2-201ENST00000624617 1940 ntBASIC21■□□□□ 0.95
CCRL2O00421 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCRL2O00421 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCRL2O00421 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCRL2O00421 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCRL2O00421 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCRL2O00421 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.99■□□□□ 0.95
CCRL2O00421 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.99■□□□□ 0.95
CCRL2O00421 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.99■□□□□ 0.95
CCRL2O00421 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCRL2O00421 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCRL2O00421 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CCRL2O00421 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCRL2O00421 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCRL2O00421 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCRL2O00421 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCRL2O00421 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCRL2O00421 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCRL2O00421 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCRL2O00421 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCRL2O00421 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.97■□□□□ 0.95
CCRL2O00421 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCRL2O00421 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCRL2O00421 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCRL2O00421 AL359504.2-201ENST00000605506 1601 ntBASIC20.96■□□□□ 0.95
CCRL2O00421 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCRL2O00421 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCRL2O00421 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.96■□□□□ 0.95
CCRL2O00421 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.96■□□□□ 0.95
CCRL2O00421 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.96■□□□□ 0.95
CCRL2O00421 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCRL2O00421 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCRL2O00421 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.96■□□□□ 0.95
CCRL2O00421 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.96■□□□□ 0.95
CCRL2O00421 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCRL2O00421 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.95■□□□□ 0.94
CCRL2O00421 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.95■□□□□ 0.94
CCRL2O00421 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.95■□□□□ 0.94
CCRL2O00421 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCRL2O00421 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCRL2O00421 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCRL2O00421 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCRL2O00421 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.94■□□□□ 0.94
CCRL2O00421 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCRL2O00421 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCRL2O00421 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCRL2O00421 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCRL2O00421 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.93■□□□□ 0.94
CCRL2O00421 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCRL2O00421 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCRL2O00421 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.93■□□□□ 0.94
CCRL2O00421 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.93■□□□□ 0.94
CCRL2O00421 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CCRL2O00421 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCRL2O00421 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCRL2O00421 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCRL2O00421 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.92■□□□□ 0.94
CCRL2O00421 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCRL2O00421 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCRL2O00421 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.92■□□□□ 0.94
CCRL2O00421 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCRL2O00421 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.92■□□□□ 0.94
CCRL2O00421 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCRL2O00421 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.92■□□□□ 0.94
CCRL2O00421 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCRL2O00421 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCRL2O00421 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.91■□□□□ 0.94
CCRL2O00421 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCRL2O00421 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.9■□□□□ 0.94
CCRL2O00421 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCRL2O00421 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCRL2O00421 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.9■□□□□ 0.94
CCRL2O00421 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCRL2O00421 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.89■□□□□ 0.94
CCRL2O00421 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
CCRL2O00421 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCRL2O00421 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
CCRL2O00421 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCRL2O00421 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCRL2O00421 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCRL2O00421 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCRL2O00421 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCRL2O00421 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCRL2O00421 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCRL2O00421 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCRL2O00421 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCRL2O00421 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCRL2O00421 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.88■□□□□ 0.93
CCRL2O00421 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.88■□□□□ 0.93
CCRL2O00421 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCRL2O00421 AL024507.2-201ENST00000606070 2574 ntBASIC20.87■□□□□ 0.93
CCRL2O00421 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms