Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM1O00151 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.19■■□□□ 1.14
PDLIM1O00151 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM1O00151 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM1O00151 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM1O00151 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM1O00151 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM1O00151 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM1O00151 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM1O00151 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM1O00151 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM1O00151 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.19■■□□□ 1.14
PDLIM1O00151 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDLIM1O00151 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.18■■□□□ 1.14
PDLIM1O00151 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDLIM1O00151 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM1O00151 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM1O00151 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PDLIM1O00151 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM1O00151 SLC6A10P-202ENST00000431994 2058 ntBASIC22.17■■□□□ 1.14
PDLIM1O00151 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM1O00151 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM1O00151 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.17■■□□□ 1.14
PDLIM1O00151 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM1O00151 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM1O00151 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM1O00151 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM1O00151 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
PDLIM1O00151 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM1O00151 DUSP8P5-201ENST00000422884 1815 ntBASIC22.16■■□□□ 1.14
PDLIM1O00151 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.16■■□□□ 1.14
PDLIM1O00151 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
PDLIM1O00151 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.16■■□□□ 1.14
PDLIM1O00151 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.16■■□□□ 1.14
PDLIM1O00151 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM1O00151 MIR219A2-201ENST00000608502 1504 ntBASIC22.16■■□□□ 1.14
PDLIM1O00151 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.15■■□□□ 1.14
PDLIM1O00151 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM1O00151 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.15■■□□□ 1.14
PDLIM1O00151 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PDLIM1O00151 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PDLIM1O00151 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PDLIM1O00151 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PDLIM1O00151 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.14■■□□□ 1.13
PDLIM1O00151 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.14■■□□□ 1.13
PDLIM1O00151 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.14■■□□□ 1.13
PDLIM1O00151 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM1O00151 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM1O00151 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PDLIM1O00151 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.13■■□□□ 1.13
PDLIM1O00151 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDLIM1O00151 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDLIM1O00151 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDLIM1O00151 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.13■■□□□ 1.13
PDLIM1O00151 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDLIM1O00151 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.12■■□□□ 1.13
PDLIM1O00151 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM1O00151 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM1O00151 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM1O00151 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM1O00151 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM1O00151 ABCB10P4-201ENST00000566803 2184 ntBASIC22.11■■□□□ 1.13
PDLIM1O00151 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PDLIM1O00151 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDLIM1O00151 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.11■■□□□ 1.13
PDLIM1O00151 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.11■■□□□ 1.13
PDLIM1O00151 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.11■■□□□ 1.13
PDLIM1O00151 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDLIM1O00151 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PDLIM1O00151 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PDLIM1O00151 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 C9orf163-202ENST00000624034 2573 ntBASIC22.1■■□□□ 1.13
PDLIM1O00151 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PDLIM1O00151 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PDLIM1O00151 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.1■■□□□ 1.13
PDLIM1O00151 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM1O00151 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms