Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHISA7A6NL88 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHISA7A6NL88 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHISA7A6NL88 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SHISA7A6NL88 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHISA7A6NL88 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHISA7A6NL88 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHISA7A6NL88 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHISA7A6NL88 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHISA7A6NL88 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHISA7A6NL88 UNC93B3-201ENST00000308076 687 ntBASIC24.02■■□□□ 1.44
SHISA7A6NL88 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.02■■□□□ 1.44
SHISA7A6NL88 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.02■■□□□ 1.44
SHISA7A6NL88 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHISA7A6NL88 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.02■■□□□ 1.44
SHISA7A6NL88 FOXO3B-201ENST00000395675 1928 ntBASIC24.02■■□□□ 1.44
SHISA7A6NL88 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHISA7A6NL88 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHISA7A6NL88 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.01■■□□□ 1.43
SHISA7A6NL88 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.01■■□□□ 1.43
SHISA7A6NL88 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.01■■□□□ 1.43
SHISA7A6NL88 MIR6722-201ENST00000617286 78 ntBASIC24.01■■□□□ 1.43
SHISA7A6NL88 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.01■■□□□ 1.43
SHISA7A6NL88 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.01■■□□□ 1.43
SHISA7A6NL88 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.01■■□□□ 1.43
SHISA7A6NL88 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHISA7A6NL88 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24■■□□□ 1.43
SHISA7A6NL88 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHISA7A6NL88 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHISA7A6NL88 AC142381.2-201ENST00000566120 298 ntBASIC24■■□□□ 1.43
SHISA7A6NL88 AC092666.2-201ENST00000613287 246 ntBASIC24■■□□□ 1.43
SHISA7A6NL88 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHISA7A6NL88 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHISA7A6NL88 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHISA7A6NL88 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHISA7A6NL88 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.99■■□□□ 1.43
SHISA7A6NL88 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.99■■□□□ 1.43
SHISA7A6NL88 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.98■■□□□ 1.43
SHISA7A6NL88 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.98■■□□□ 1.43
SHISA7A6NL88 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SHISA7A6NL88 AC135279.3-201ENST00000610945 1311 ntBASIC23.98■■□□□ 1.43
SHISA7A6NL88 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.98■■□□□ 1.43
SHISA7A6NL88 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHISA7A6NL88 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.98■■□□□ 1.43
SHISA7A6NL88 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHISA7A6NL88 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHISA7A6NL88 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.97■■□□□ 1.43
SHISA7A6NL88 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHISA7A6NL88 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.97■■□□□ 1.43
SHISA7A6NL88 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.97■■□□□ 1.43
SHISA7A6NL88 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHISA7A6NL88 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SHISA7A6NL88 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SHISA7A6NL88 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHISA7A6NL88 AL136162.1-201ENST00000607711 1078 ntBASIC23.96■■□□□ 1.43
SHISA7A6NL88 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SHISA7A6NL88 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHISA7A6NL88 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SHISA7A6NL88 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHISA7A6NL88 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SHISA7A6NL88 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.95■■□□□ 1.42
SHISA7A6NL88 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SHISA7A6NL88 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SHISA7A6NL88 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHISA7A6NL88 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHISA7A6NL88 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHISA7A6NL88 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHISA7A6NL88 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHISA7A6NL88 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHISA7A6NL88 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHISA7A6NL88 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHISA7A6NL88 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHISA7A6NL88 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
SHISA7A6NL88 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.93■■□□□ 1.42
SHISA7A6NL88 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHISA7A6NL88 AC090877.2-201ENST00000558441 1738 ntBASIC23.93■■□□□ 1.42
SHISA7A6NL88 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHISA7A6NL88 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SHISA7A6NL88 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHISA7A6NL88 AC024257.2-201ENST00000549699 147 ntBASIC23.92■■□□□ 1.42
SHISA7A6NL88 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHISA7A6NL88 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHISA7A6NL88 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHISA7A6NL88 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SHISA7A6NL88 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHISA7A6NL88 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHISA7A6NL88 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SHISA7A6NL88 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.9■■□□□ 1.42
SHISA7A6NL88 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.9■■□□□ 1.42
SHISA7A6NL88 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHISA7A6NL88 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
SHISA7A6NL88 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms