Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 BX664725.1-201ENST00000438252 379 ntBASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 AC090877.2-201ENST00000558441 1738 ntBASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 Z92544.1-202ENST00000571933 1220 ntBASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 AC239859.2-201ENST00000444165 318 ntBASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 AC137630.3-201ENST00000607245 391 ntBASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 KRT125P-201ENST00000546827 989 ntBASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPDYE3A6NKU9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.74■■□□□ 1.87
SPDYE3A6NKU9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 GUSBP5-201ENST00000418136 578 ntBASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SPDYE3A6NKU9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
SPDYE3A6NKU9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SPDYE3A6NKU9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.7■■□□□ 1.86
SPDYE3A6NKU9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SPDYE3A6NKU9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 MIR4787-201ENST00000607364 84 ntBASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 AC021242.3-201ENST00000607598 1377 ntBASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPDYE3A6NKU9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPDYE3A6NKU9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms