Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 ZNRF2P2-203ENST00000454624 420 ntBASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-1A0A0B4J241 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV13-1A0A0B4J241 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV13-1A0A0B4J241 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-1A0A0B4J241 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV13-1A0A0B4J241 AC133561.1-201ENST00000568600 2415 ntBASIC16.21■□□□□ 0.19
TRAV13-1A0A0B4J241 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-1A0A0B4J241 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
TRAV13-1A0A0B4J241 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRAV13-1A0A0B4J241 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV13-1A0A0B4J241 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 LINC00543-201ENST00000567234 1845 ntBASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-1A0A0B4J241 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV13-1A0A0B4J241 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
TRAV13-1A0A0B4J241 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 CR559946.2-201ENST00000623684 991 ntBASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms