Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 AC142381.3-201ENST00000568208 1670 ntBASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 SPCS2P3-201ENST00000500401 656 ntBASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 NTF6A-201ENST00000591175 560 ntBASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 AC018755.3-202ENST00000596210 929 ntBASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV9A0A0B4J1U6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRBV9A0A0B4J1U6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV9A0A0B4J1U6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV9A0A0B4J1U6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV9A0A0B4J1U6 KRT18P60-201ENST00000312876 1297 ntBASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRBV9A0A0B4J1U6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV9A0A0B4J1U6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 DUX4L9-201ENST00000449051 1259 ntBASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 AC129492.7-201ENST00000622992 756 ntBASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV9A0A0B4J1U6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV9A0A0B4J1U6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRBV9A0A0B4J1U6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV9A0A0B4J1U6 MIR6765-201ENST00000614092 87 ntBASIC18.55■□□□□ 0.56
TRBV9A0A0B4J1U6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV9A0A0B4J1U6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV9A0A0B4J1U6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.53■□□□□ 0.56
TRBV9A0A0B4J1U6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
TRBV9A0A0B4J1U6 RPS2P7-201ENST00000447334 885 ntBASIC18.53■□□□□ 0.56
TRBV9A0A0B4J1U6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
TRBV9A0A0B4J1U6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV9A0A0B4J1U6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV9A0A0B4J1U6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV9A0A0B4J1U6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRBV9A0A0B4J1U6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV9A0A0B4J1U6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRBV9A0A0B4J1U6 SLC6A10P-202ENST00000431994 2058 ntBASIC18.52■□□□□ 0.56
TRBV9A0A0B4J1U6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV9A0A0B4J1U6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV9A0A0B4J1U6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV9A0A0B4J1U6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV9A0A0B4J1U6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRBV9A0A0B4J1U6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV9A0A0B4J1U6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV9A0A0B4J1U6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 AC087393.1-201ENST00000582896 145 ntBASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV9A0A0B4J1U6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms