Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 AL359504.2-201ENST00000605506 1601 ntBASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 CLDN5-201ENST00000403084 2357 ntBASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCL1Q9Y2P8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 AC087741.3-201ENST00000624270 1347 ntBASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RCL1Q9Y2P8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCL1Q9Y2P8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCL1Q9Y2P8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCL1Q9Y2P8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RCL1Q9Y2P8 ABCB10P4-201ENST00000566803 2184 ntBASIC19.15■□□□□ 0.66
RCL1Q9Y2P8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RCL1Q9Y2P8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RCL1Q9Y2P8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RCL1Q9Y2P8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RCL1Q9Y2P8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCL1Q9Y2P8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 AP006261.1-201ENST00000584783 668 ntBASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 AC021231.2-201ENST00000594613 730 ntBASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 C9orf163-202ENST00000624034 2573 ntBASIC19.12■□□□□ 0.65
RCL1Q9Y2P8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 MIR219A2-201ENST00000608502 1504 ntBASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCL1Q9Y2P8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 AL359258.2-201ENST00000564063 1566 ntBASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
RCL1Q9Y2P8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms