Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD4Q9H0A8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD4Q9H0A8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COMMD4Q9H0A8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD4Q9H0A8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD4Q9H0A8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD4Q9H0A8 MIR3648-2-201ENST00000581792 180 ntBASIC20.7■□□□□ 0.9
COMMD4Q9H0A8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.7■□□□□ 0.9
COMMD4Q9H0A8 MIR3648-1-201ENST00000615959 180 ntBASIC20.7■□□□□ 0.9
COMMD4Q9H0A8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.7■□□□□ 0.9
COMMD4Q9H0A8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD4Q9H0A8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.68■□□□□ 0.9
COMMD4Q9H0A8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 MIR3960-201ENST00000583311 91 ntBASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD4Q9H0A8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COMMD4Q9H0A8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
COMMD4Q9H0A8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COMMD4Q9H0A8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
COMMD4Q9H0A8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD4Q9H0A8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.64■□□□□ 0.89
COMMD4Q9H0A8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD4Q9H0A8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COMMD4Q9H0A8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD4Q9H0A8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD4Q9H0A8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 AC025884.2-201ENST00000553429 711 ntBASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD4Q9H0A8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 AC016575.1-201ENST00000607026 382 ntBASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 MIR6089-201ENST00000616698 64 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms