Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLIRPQ9GZT3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLIRPQ9GZT3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLIRPQ9GZT3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLIRPQ9GZT3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SLIRPQ9GZT3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLIRPQ9GZT3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.86■□□□□ 0.93
SLIRPQ9GZT3 AL391121.1-201ENST00000607967 1349 ntBASIC20.86■□□□□ 0.93
SLIRPQ9GZT3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.86■□□□□ 0.93
SLIRPQ9GZT3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLIRPQ9GZT3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.86■□□□□ 0.93
SLIRPQ9GZT3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLIRPQ9GZT3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLIRPQ9GZT3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLIRPQ9GZT3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.84■□□□□ 0.93
SLIRPQ9GZT3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLIRPQ9GZT3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLIRPQ9GZT3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLIRPQ9GZT3 AC110285.7-201ENST00000624417 1536 ntBASIC20.83■□□□□ 0.93
SLIRPQ9GZT3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLIRPQ9GZT3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLIRPQ9GZT3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLIRPQ9GZT3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.83■□□□□ 0.92
SLIRPQ9GZT3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLIRPQ9GZT3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLIRPQ9GZT3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.82■□□□□ 0.92
SLIRPQ9GZT3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLIRPQ9GZT3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLIRPQ9GZT3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLIRPQ9GZT3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 C1orf229-201ENST00000623686 2258 ntBASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLIRPQ9GZT3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 AC137767.1-201ENST00000602918 1920 ntBASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLIRPQ9GZT3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.79■□□□□ 0.92
SLIRPQ9GZT3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLIRPQ9GZT3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLIRPQ9GZT3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLIRPQ9GZT3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLIRPQ9GZT3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 LINC00526-201ENST00000581067 1875 ntBASIC20.77■□□□□ 0.92
SLIRPQ9GZT3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SLIRPQ9GZT3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLIRPQ9GZT3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLIRPQ9GZT3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms