Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 AC137767.1-201ENST00000602918 1920 ntBASIC19.02■□□□□ 0.64
NKX6-2Q9C056 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NKX6-2Q9C056 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 AC007375.3-201ENST00000600936 2314 ntBASIC19.01■□□□□ 0.63
NKX6-2Q9C056 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NKX6-2Q9C056 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX6-2Q9C056 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-2Q9C056 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-2Q9C056 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19■□□□□ 0.63
NKX6-2Q9C056 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-2Q9C056 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-2Q9C056 AC233723.2-201ENST00000623798 2106 ntBASIC19■□□□□ 0.63
NKX6-2Q9C056 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-2Q9C056 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 RNF165-205ENST00000588679 2904 ntBASIC18.99■□□□□ 0.63
NKX6-2Q9C056 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.99■□□□□ 0.63
NKX6-2Q9C056 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-2Q9C056 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-2Q9C056 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NKX6-2Q9C056 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-2Q9C056 SETD8P1-201ENST00000623146 1180 ntBASIC18.96■□□□□ 0.63
NKX6-2Q9C056 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-2Q9C056 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-2Q9C056 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-2Q9C056 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 RARRES2P7-201ENST00000567349 469 ntBASIC18.95■□□□□ 0.62
NKX6-2Q9C056 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.95■□□□□ 0.62
NKX6-2Q9C056 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX6-2Q9C056 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX6-2Q9C056 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NKX6-2Q9C056 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-2Q9C056 AL391121.1-201ENST00000607967 1349 ntBASIC18.93■□□□□ 0.62
NKX6-2Q9C056 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NKX6-2Q9C056 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-2Q9C056 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX6-2Q9C056 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 AC142472.1-201ENST00000612013 1741 ntBASIC18.92■□□□□ 0.62
NKX6-2Q9C056 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX6-2Q9C056 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms