Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF4Q9BUZ4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAF4Q9BUZ4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF4Q9BUZ4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 AL139125.2-201ENST00000623134 1869 ntBASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF4Q9BUZ4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRAF4Q9BUZ4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 AC018755.3-202ENST00000596210 929 ntBASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF4Q9BUZ4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 AC139795.1-202ENST00000500444 432 ntBASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 AC010980.1-201ENST00000587192 1142 ntBASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF4Q9BUZ4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF4Q9BUZ4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF4Q9BUZ4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TRAF4Q9BUZ4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAF4Q9BUZ4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAF4Q9BUZ4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.89■□□□□ 0.94
TRAF4Q9BUZ4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF4Q9BUZ4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 AL451085.2-201ENST00000605085 799 ntBASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRAF4Q9BUZ4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 AL035685.1-201ENST00000636663 812 ntBASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 KRT8P33-201ENST00000508125 1423 ntBASIC20.87■□□□□ 0.93
TRAF4Q9BUZ4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF4Q9BUZ4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF4Q9BUZ4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF4Q9BUZ4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF4Q9BUZ4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms