Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HDHD3Q9BSH5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDHD3Q9BSH5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDHD3Q9BSH5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HDHD3Q9BSH5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDHD3Q9BSH5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.87■□□□□ 0.77
HDHD3Q9BSH5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDHD3Q9BSH5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 MIR3960-201ENST00000583311 91 ntBASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HDHD3Q9BSH5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HDHD3Q9BSH5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HDHD3Q9BSH5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HDHD3Q9BSH5 SMPD5-203ENST00000639008 1464 ntBASIC19.84■□□□□ 0.77
HDHD3Q9BSH5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
HDHD3Q9BSH5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.83■□□□□ 0.77
HDHD3Q9BSH5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HDHD3Q9BSH5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HDHD3Q9BSH5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDHD3Q9BSH5 AC133561.1-201ENST00000568600 2415 ntBASIC19.83■□□□□ 0.77
HDHD3Q9BSH5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDHD3Q9BSH5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.83■□□□□ 0.76
HDHD3Q9BSH5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HDHD3Q9BSH5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HDHD3Q9BSH5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HDHD3Q9BSH5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HDHD3Q9BSH5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HDHD3Q9BSH5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HDHD3Q9BSH5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
HDHD3Q9BSH5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDHD3Q9BSH5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 AC092296.2-201ENST00000589470 999 ntBASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 AC004812.2-201ENST00000611079 2094 ntBASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.8■□□□□ 0.76
HDHD3Q9BSH5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDHD3Q9BSH5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDHD3Q9BSH5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms