Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LINC00242Q5T6M2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 AC126177.7-201ENST00000547904 679 ntBASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00242Q5T6M2 AC004812.2-201ENST00000611079 2094 ntBASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 DUSP8P5-201ENST00000422884 1815 ntBASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00242Q5T6M2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00242Q5T6M2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00242Q5T6M2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LINC00242Q5T6M2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00242Q5T6M2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00242Q5T6M2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00242Q5T6M2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
LINC00242Q5T6M2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.07■□□□□ 0.16
LINC00242Q5T6M2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LINC00242Q5T6M2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LINC00242Q5T6M2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LINC00242Q5T6M2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00242Q5T6M2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 MIR6089-201ENST00000616698 64 ntBASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 ABCB10P4-201ENST00000566803 2184 ntBASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00242Q5T6M2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00242Q5T6M2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms