Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ODF4Q2M2E3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ODF4Q2M2E3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.74■□□□□ 0.91
ODF4Q2M2E3 AC060814.1-201ENST00000554326 538 ntBASIC20.74■□□□□ 0.91
ODF4Q2M2E3 MIR7108-201ENST00000614319 87 ntBASIC20.74■□□□□ 0.91
ODF4Q2M2E3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ODF4Q2M2E3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.74■□□□□ 0.91
ODF4Q2M2E3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ODF4Q2M2E3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ODF4Q2M2E3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ODF4Q2M2E3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ODF4Q2M2E3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ODF4Q2M2E3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ODF4Q2M2E3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ODF4Q2M2E3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 SMPD5-203ENST00000639008 1464 ntBASIC20.71■□□□□ 0.91
ODF4Q2M2E3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 AC025884.2-201ENST00000553429 711 ntBASIC20.71■□□□□ 0.91
ODF4Q2M2E3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ODF4Q2M2E3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 MIR3960-201ENST00000583311 91 ntBASIC20.7■□□□□ 0.9
ODF4Q2M2E3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ODF4Q2M2E3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ODF4Q2M2E3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ODF4Q2M2E3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ODF4Q2M2E3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.66■□□□□ 0.9
ODF4Q2M2E3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.66■□□□□ 0.9
ODF4Q2M2E3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ODF4Q2M2E3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ODF4Q2M2E3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ODF4Q2M2E3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ODF4Q2M2E3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.65■□□□□ 0.9
ODF4Q2M2E3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.64■□□□□ 0.9
ODF4Q2M2E3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ODF4Q2M2E3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ODF4Q2M2E3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms