Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APOC4P55056 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.32■□□□□ 0.36
APOC4P55056 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.32■□□□□ 0.36
APOC4P55056 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOC4P55056 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
APOC4P55056 FOXO3B-201ENST00000395675 1928 ntBASIC17.31■□□□□ 0.36
APOC4P55056 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APOC4P55056 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APOC4P55056 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOC4P55056 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.31■□□□□ 0.36
APOC4P55056 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APOC4P55056 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
APOC4P55056 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOC4P55056 ERN1-208ENST00000606895 2068 ntBASIC17.3■□□□□ 0.36
APOC4P55056 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.29■□□□□ 0.36
APOC4P55056 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
APOC4P55056 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 GUSBP5-201ENST00000418136 578 ntBASIC17.29■□□□□ 0.36
APOC4P55056 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC4P55056 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC4P55056 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
APOC4P55056 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC4P55056 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOC4P55056 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APOC4P55056 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APOC4P55056 AC137630.3-201ENST00000607245 391 ntBASIC17.28■□□□□ 0.36
APOC4P55056 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.28■□□□□ 0.36
APOC4P55056 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 AC096887.2-201ENST00000623443 1957 ntBASIC17.28■□□□□ 0.36
APOC4P55056 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC4P55056 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
APOC4P55056 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
APOC4P55056 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.27■□□□□ 0.36
APOC4P55056 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.27■□□□□ 0.36
APOC4P55056 MIR4281-201ENST00000580852 62 ntBASIC17.27■□□□□ 0.36
APOC4P55056 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC4P55056 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
APOC4P55056 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.26■□□□□ 0.35
APOC4P55056 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.26■□□□□ 0.35
APOC4P55056 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.26■□□□□ 0.35
APOC4P55056 MIR4787-201ENST00000607364 84 ntBASIC17.26■□□□□ 0.35
APOC4P55056 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC4P55056 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC4P55056 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC4P55056 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC4P55056 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC4P55056 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.25■□□□□ 0.35
APOC4P55056 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC4P55056 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC4P55056 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC4P55056 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
APOC4P55056 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.24■□□□□ 0.35
APOC4P55056 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
APOC4P55056 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.24■□□□□ 0.35
APOC4P55056 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOC4P55056 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC4P55056 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOC4P55056 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC4P55056 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOC4P55056 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC4P55056 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC4P55056 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC4P55056 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC4P55056 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOC4P55056 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC4P55056 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms