Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MECP2P51608 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MECP2P51608 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MECP2P51608 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MECP2P51608 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MECP2P51608 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MECP2P51608 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MECP2P51608 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MECP2P51608 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MECP2P51608 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MECP2P51608 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MECP2P51608 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MECP2P51608 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
MECP2P51608 AL117328.2-201ENST00000624617 1940 ntBASIC20.01■□□□□ 0.79
MECP2P51608 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MECP2P51608 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MECP2P51608 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.01■□□□□ 0.79
MECP2P51608 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.01■□□□□ 0.79
MECP2P51608 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20■□□□□ 0.79
MECP2P51608 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20■□□□□ 0.79
MECP2P51608 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MECP2P51608 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20■□□□□ 0.79
MECP2P51608 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20■□□□□ 0.79
MECP2P51608 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MECP2P51608 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 SLC6A10P-202ENST00000431994 2058 ntBASIC19.99■□□□□ 0.79
MECP2P51608 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
MECP2P51608 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.99■□□□□ 0.79
MECP2P51608 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MECP2P51608 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
MECP2P51608 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.98■□□□□ 0.79
MECP2P51608 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
MECP2P51608 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MECP2P51608 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MECP2P51608 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
MECP2P51608 AC004812.2-201ENST00000611079 2094 ntBASIC19.98■□□□□ 0.79
MECP2P51608 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.97■□□□□ 0.79
MECP2P51608 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MECP2P51608 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MECP2P51608 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.97■□□□□ 0.79
MECP2P51608 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
MECP2P51608 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MECP2P51608 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MECP2P51608 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.96■□□□□ 0.79
MECP2P51608 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.96■□□□□ 0.79
MECP2P51608 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MECP2P51608 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
MECP2P51608 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
MECP2P51608 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MECP2P51608 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 AC110285.7-201ENST00000624417 1536 ntBASIC19.95■□□□□ 0.78
MECP2P51608 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MECP2P51608 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MECP2P51608 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.94■□□□□ 0.78
MECP2P51608 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.94■□□□□ 0.78
MECP2P51608 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.94■□□□□ 0.78
MECP2P51608 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MECP2P51608 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MECP2P51608 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MECP2P51608 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.93■□□□□ 0.78
MECP2P51608 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MECP2P51608 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms