Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 ECM31YBR176W 939 nt7.01□□□□□ -1.29
MSH3P25336 CYS4YGR155W 1524 nt7.01□□□□□ -1.29
MSH3P25336 MEH1YKR007W 555 nt7□□□□□ -1.29
MSH3P25336 TAF9YMR236W 474 nt7□□□□□ -1.29
MSH3P25336 RCE1YMR274C 948 nt7□□□□□ -1.29
MSH3P25336 SSU72YNL222W 621 nt7□□□□□ -1.29
MSH3P25336 SFT2YBL102W 648 nt7□□□□□ -1.29
MSH3P25336 YPL136WYPL136W 369 nt7□□□□□ -1.29
MSH3P25336 STE13YOR219C 2796 nt6.99□□□□□ -1.29
MSH3P25336 MTC5YDR128W 3447 nt6.99□□□□□ -1.29
MSH3P25336 WSS1YHR134W 810 nt6.99□□□□□ -1.29
MSH3P25336 ICS3YJL077C 396 nt6.99□□□□□ -1.29
MSH3P25336 EFM3YJR129C 1020 nt6.99□□□□□ -1.29
MSH3P25336 YLL059CYLL059C 507 nt6.99□□□□□ -1.29
MSH3P25336 HCR1YLR192C 798 nt6.99□□□□□ -1.29
MSH3P25336 HAS1YMR290C 1518 nt6.99□□□□□ -1.29
MSH3P25336 GPD2YOL059W 1323 nt6.99□□□□□ -1.29
MSH3P25336 PGM1YKL127W 1713 nt6.98□□□□□ -1.29
MSH3P25336 AFG1YEL052W 1530 nt6.98□□□□□ -1.29
MSH3P25336 MRPL35YDR322W 1104 nt6.98□□□□□ -1.29
MSH3P25336 YNG2YHR090C 849 nt6.98□□□□□ -1.29
MSH3P25336 DCG1YIR030C 735 nt6.98□□□□□ -1.29
MSH3P25336 HSP150YJL159W 1242 nt6.98□□□□□ -1.29
MSH3P25336 FAR3YMR052W 615 nt6.98□□□□□ -1.29
MSH3P25336 GTO3YMR251W 1101 nt6.98□□□□□ -1.29
MSH3P25336 YNL226WYNL226W 411 nt6.98□□□□□ -1.29
MSH3P25336 PTC4YBR125C 1182 nt6.98□□□□□ -1.29
MSH3P25336 YDR514CYDR514C 1452 nt6.98□□□□□ -1.29
MSH3P25336 RTT103YDR289C 1230 nt6.97□□□□□ -1.29
MSH3P25336 GCG1YER163C 699 nt6.97□□□□□ -1.29
MSH3P25336 ERV14YGL054C 417 nt6.97□□□□□ -1.29
MSH3P25336 MRPL6YHR147C 645 nt6.97□□□□□ -1.29
MSH3P25336 ECM9YKR004C 1134 nt6.97□□□□□ -1.29
MSH3P25336 DUS4YLR405W 1104 nt6.97□□□□□ -1.29
MSH3P25336 SNN1YNL086W 309 nt6.97□□□□□ -1.29
MSH3P25336 YPL014WYPL014W 1146 nt6.97□□□□□ -1.29
MSH3P25336 HFI1YPL254W 1467 nt6.97□□□□□ -1.29
MSH3P25336 CMR1YDL156W 1569 nt6.96□□□□□ -1.29
MSH3P25336 YCR016WYCR016W 873 nt6.96□□□□□ -1.3
MSH3P25336 OM45YIL136W 1182 nt6.96□□□□□ -1.3
MSH3P25336 PML1YLR016C 615 nt6.96□□□□□ -1.3
MSH3P25336 MRPS18YNL306W 654 nt6.96□□□□□ -1.3
MSH3P25336 Q0017Q0017 162 nt6.96□□□□□ -1.3
MSH3P25336 NUR1YDL089W 1455 nt6.96□□□□□ -1.3
MSH3P25336 ERG8YMR220W 1356 nt6.95□□□□□ -1.3
MSH3P25336 YMR279CYMR279C 1623 nt6.95□□□□□ -1.3
MSH3P25336 HVG1YER039C 750 nt6.95□□□□□ -1.3
MSH3P25336 ERG26YGL001C 1050 nt6.95□□□□□ -1.3
MSH3P25336 YKR045CYKR045C 552 nt6.95□□□□□ -1.3
MSH3P25336 PSR1YLL010C 1284 nt6.95□□□□□ -1.3
MSH3P25336 MHT1YLL062C 975 nt6.95□□□□□ -1.3
MSH3P25336 IES2YNL215W 963 nt6.95□□□□□ -1.3
MSH3P25336 KTR1YOR099W 1182 nt6.95□□□□□ -1.3
MSH3P25336 MDM10YAL010C 1482 nt6.95□□□□□ -1.3
MSH3P25336 RRP14YKL082C 1305 nt6.95□□□□□ -1.3
MSH3P25336 XBP1YIL101C 1944 nt6.94□□□□□ -1.3
MSH3P25336 YDL026WYDL026W 312 nt6.94□□□□□ -1.3
MSH3P25336 VPS61YDR136C 573 nt6.94□□□□□ -1.3
MSH3P25336 LCB3YJL134W 1230 nt6.94□□□□□ -1.3
MSH3P25336 ATP4YPL078C 735 nt6.94□□□□□ -1.3
MSH3P25336 MKK1YOR231W 1527 nt6.94□□□□□ -1.3
MSH3P25336 SCL1YGL011C 759 nt6.93□□□□□ -1.3
MSH3P25336 COA1YIL157C 594 nt6.93□□□□□ -1.3
MSH3P25336 MPM1YJL066C 759 nt6.93□□□□□ -1.3
MSH3P25336 BSC4YNL269W 396 nt6.93□□□□□ -1.3
MSH3P25336 YOL035CYOL035C 303 nt6.93□□□□□ -1.3
MSH3P25336 HAT1YPL001W 1125 nt6.93□□□□□ -1.3
MSH3P25336 UBA3YPR066W 900 nt6.93□□□□□ -1.3
MSH3P25336 MPA43YNL249C 1629 nt6.93□□□□□ -1.3
MSH3P25336 YNL247WYNL247W 2304 nt6.92□□□□□ -1.3
MSH3P25336 SHR3YDL212W 633 nt6.92□□□□□ -1.3
MSH3P25336 YFT2YDR319C 825 nt6.92□□□□□ -1.3
MSH3P25336 YIL029W-AYIL029W-A 372 nt6.92□□□□□ -1.3
MSH3P25336 TFB6YOR352W 1032 nt6.92□□□□□ -1.3
MSH3P25336 SUI3YPL237W 858 nt6.92□□□□□ -1.3
MSH3P25336 VHS1YDR247W 1386 nt6.92□□□□□ -1.3
MSH3P25336 OMS1YDR316W 1416 nt6.92□□□□□ -1.3
MSH3P25336 PDR18YNR070W 4002 nt6.91□□□□□ -1.3
MSH3P25336 PEX7YDR142C 1128 nt6.91□□□□□ -1.3
MSH3P25336 YDR278CYDR278C 318 nt6.91□□□□□ -1.3
MSH3P25336 YLL047WYLL047W 384 nt6.91□□□□□ -1.3
MSH3P25336 GTR1YML121W 933 nt6.91□□□□□ -1.3
MSH3P25336 PFK2YMR205C 2880 nt6.91□□□□□ -1.3
MSH3P25336 YFL052WYFL052W 1398 nt6.91□□□□□ -1.3
MSH3P25336 PTC3YBL056W 1407 nt6.91□□□□□ -1.3
MSH3P25336 PYC2YBR218C 3543 nt6.9□□□□□ -1.3
MSH3P25336 AMD2YDR242W 1650 nt6.9□□□□□ -1.3
MSH3P25336 VAR1Q0140 1197 nt6.9□□□□□ -1.3
MSH3P25336 SKI8YGL213C 1194 nt6.9□□□□□ -1.3
MSH3P25336 FZF1YGL254W 900 nt6.9□□□□□ -1.3
MSH3P25336 SPO16YHR153C 597 nt6.9□□□□□ -1.3
MSH3P25336 YJR084WYJR084W 1272 nt6.9□□□□□ -1.3
MSH3P25336 RDL1YOR285W 420 nt6.9□□□□□ -1.3
MSH3P25336 YSA1YBR111C 696 nt6.9□□□□□ -1.3
MSH3P25336 ILV6YCL009C 930 nt6.9□□□□□ -1.3
MSH3P25336 NSE3YDR288W 912 nt6.89□□□□□ -1.31
MSH3P25336 PHO92YDR374C 921 nt6.89□□□□□ -1.31
MSH3P25336 SRY1YKL218C 981 nt6.89□□□□□ -1.31
MSH3P25336 PSY3YLR376C 729 nt6.89□□□□□ -1.31
MSH3P25336 YML090WYML090W 387 nt6.89□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms