Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
BRD4O60885 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
BRD4O60885 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
BRD4O60885 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.93■■■□□ 2.86
BRD4O60885 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.93■■■□□ 2.86
BRD4O60885 AC021242.3-201ENST00000607598 1377 ntBASIC32.92■■■□□ 2.86
BRD4O60885 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.92■■■□□ 2.86
BRD4O60885 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.92■■■□□ 2.86
BRD4O60885 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.92■■■□□ 2.86
BRD4O60885 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
BRD4O60885 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.91■■■□□ 2.86
BRD4O60885 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
BRD4O60885 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.91■■■□□ 2.86
BRD4O60885 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.91■■■□□ 2.86
BRD4O60885 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.91■■■□□ 2.86
BRD4O60885 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
BRD4O60885 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.9■■■□□ 2.86
BRD4O60885 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
BRD4O60885 AC120024.1-201ENST00000562672 995 ntBASIC32.89■■■□□ 2.86
BRD4O60885 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.89■■■□□ 2.86
BRD4O60885 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.88■■■□□ 2.85
BRD4O60885 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
BRD4O60885 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
BRD4O60885 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
BRD4O60885 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
BRD4O60885 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
BRD4O60885 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
BRD4O60885 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.87■■■□□ 2.85
BRD4O60885 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.87■■■□□ 2.85
BRD4O60885 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC32.87■■■□□ 2.85
BRD4O60885 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
BRD4O60885 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
BRD4O60885 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
BRD4O60885 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
BRD4O60885 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.86■■■□□ 2.85
BRD4O60885 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
BRD4O60885 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC32.86■■■□□ 2.85
BRD4O60885 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
BRD4O60885 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.86■■■□□ 2.85
BRD4O60885 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
BRD4O60885 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC32.86■■■□□ 2.85
BRD4O60885 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
BRD4O60885 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
BRD4O60885 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
BRD4O60885 KRT16P3-201ENST00000439127 1283 ntBASIC32.84■■■□□ 2.85
BRD4O60885 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
BRD4O60885 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
BRD4O60885 AC010501.1-201ENST00000606270 1962 ntBASIC32.84■■■□□ 2.85
BRD4O60885 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
BRD4O60885 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
BRD4O60885 ERN1-208ENST00000606895 2068 ntBASIC32.83■■■□□ 2.85
BRD4O60885 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
BRD4O60885 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
BRD4O60885 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.82■■■□□ 2.84
BRD4O60885 AC008406.3-201ENST00000620001 1374 ntBASIC32.82■■■□□ 2.84
BRD4O60885 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.84
BRD4O60885 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC32.81■■■□□ 2.84
BRD4O60885 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
BRD4O60885 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
BRD4O60885 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
BRD4O60885 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
BRD4O60885 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC32.81■■■□□ 2.84
BRD4O60885 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
BRD4O60885 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.8■■■□□ 2.84
BRD4O60885 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
BRD4O60885 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.8■■■□□ 2.84
BRD4O60885 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
BRD4O60885 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
BRD4O60885 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.79■■■□□ 2.84
BRD4O60885 MIR4281-201ENST00000580852 62 ntBASIC32.79■■■□□ 2.84
BRD4O60885 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
BRD4O60885 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.78■■■□□ 2.84
BRD4O60885 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC32.78■■■□□ 2.84
BRD4O60885 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
BRD4O60885 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
BRD4O60885 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
BRD4O60885 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.77■■■□□ 2.84
BRD4O60885 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.77■■■□□ 2.84
BRD4O60885 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
BRD4O60885 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.77■■■□□ 2.84
BRD4O60885 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
BRD4O60885 AC011551.1-201ENST00000614101 683 ntBASIC32.76■■■□□ 2.83
BRD4O60885 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
BRD4O60885 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.75■■■□□ 2.83
BRD4O60885 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.75■■■□□ 2.83
BRD4O60885 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.75■■■□□ 2.83
BRD4O60885 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.75■■■□□ 2.83
BRD4O60885 AC092028.1-203ENST00000608262 953 ntBASIC32.74■■■□□ 2.83
BRD4O60885 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC32.74■■■□□ 2.83
BRD4O60885 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
BRD4O60885 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
BRD4O60885 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.73■■■□□ 2.83
BRD4O60885 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.73■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms