Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.34■■□□□ 1.65
FOXN3O00409 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.33■■□□□ 1.65
FOXN3O00409 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN3O00409 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN3O00409 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXN3O00409 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.32■■□□□ 1.64
FOXN3O00409 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
FOXN3O00409 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXN3O00409 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN3O00409 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN3O00409 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN3O00409 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN3O00409 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.3■■□□□ 1.64
FOXN3O00409 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
FOXN3O00409 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN3O00409 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN3O00409 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
FOXN3O00409 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN3O00409 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.29■■□□□ 1.64
FOXN3O00409 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.29■■□□□ 1.64
FOXN3O00409 AC018755.3-202ENST00000596210 929 ntBASIC25.29■■□□□ 1.64
FOXN3O00409 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.29■■□□□ 1.64
FOXN3O00409 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN3O00409 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.29■■□□□ 1.64
FOXN3O00409 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.29■■□□□ 1.64
FOXN3O00409 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
FOXN3O00409 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXN3O00409 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.28■■□□□ 1.64
FOXN3O00409 DUX4L9-201ENST00000449051 1259 ntBASIC25.28■■□□□ 1.64
FOXN3O00409 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.28■■□□□ 1.64
FOXN3O00409 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.28■■□□□ 1.64
FOXN3O00409 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
FOXN3O00409 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXN3O00409 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXN3O00409 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.28■■□□□ 1.64
FOXN3O00409 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.27■■□□□ 1.64
FOXN3O00409 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN3O00409 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.27■■□□□ 1.64
FOXN3O00409 RPS2P7-201ENST00000447334 885 ntBASIC25.27■■□□□ 1.64
FOXN3O00409 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN3O00409 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN3O00409 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.27■■□□□ 1.64
FOXN3O00409 FOXO3B-201ENST00000395675 1928 ntBASIC25.27■■□□□ 1.64
FOXN3O00409 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN3O00409 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN3O00409 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
FOXN3O00409 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
FOXN3O00409 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN3O00409 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN3O00409 KRT18P60-201ENST00000312876 1297 ntBASIC25.26■■□□□ 1.63
FOXN3O00409 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN3O00409 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.26■■□□□ 1.63
FOXN3O00409 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
FOXN3O00409 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN3O00409 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
FOXN3O00409 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXN3O00409 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN3O00409 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.26■■□□□ 1.63
FOXN3O00409 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXN3O00409 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
FOXN3O00409 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FOXN3O00409 AC129492.7-201ENST00000622992 756 ntBASIC25.25■■□□□ 1.63
FOXN3O00409 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
FOXN3O00409 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXN3O00409 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
FOXN3O00409 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.24■■□□□ 1.63
FOXN3O00409 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.24■■□□□ 1.63
FOXN3O00409 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
FOXN3O00409 LINC01124-201ENST00000409786 2117 ntBASIC25.23■■□□□ 1.63
FOXN3O00409 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXN3O00409 MIR6765-201ENST00000614092 87 ntBASIC25.23■■□□□ 1.63
FOXN3O00409 MIR6089-201ENST00000616698 64 ntBASIC25.23■■□□□ 1.63
FOXN3O00409 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN3O00409 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.23■■□□□ 1.63
FOXN3O00409 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN3O00409 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.22■■□□□ 1.63
FOXN3O00409 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.22■■□□□ 1.63
FOXN3O00409 ABHD17AP5-201ENST00000580133 923 ntBASIC25.22■■□□□ 1.63
FOXN3O00409 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXN3O00409 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXN3O00409 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.22■■□□□ 1.63
FOXN3O00409 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN3O00409 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN3O00409 AC087393.1-201ENST00000582896 145 ntBASIC25.21■■□□□ 1.63
FOXN3O00409 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
FOXN3O00409 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
FOXN3O00409 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.2■■□□□ 1.62
FOXN3O00409 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.2■■□□□ 1.62
FOXN3O00409 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.2■■□□□ 1.62
FOXN3O00409 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
FOXN3O00409 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN3O00409 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.19■■□□□ 1.62
FOXN3O00409 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN3O00409 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.19■■□□□ 1.62
FOXN3O00409 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN3O00409 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN3O00409 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
FOXN3O00409 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN3O00409 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN3O00409 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms