Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 PVT1_1.1-201ENST00000615125 194 ntBASIC24.72■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.71■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 AC020928.2-201ENST00000588717 2197 ntBASIC24.7■■□□□ 1.55
SYNJ2BP-COX16A0A087WUM0 LONRF2P2-201ENST00000439212 571 ntBASIC24.7■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.7■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.68■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 AC074183.2-201ENST00000623112 922 ntBASIC24.66■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 FOXO3B-201ENST00000395675 1928 ntBASIC24.66■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 SLC6A10P-202ENST00000431994 2058 ntBASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.64■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.64■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.64■■□□□ 1.54
SYNJ2BP-COX16A0A087WUM0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.63■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.63■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.6■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.59■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
SYNJ2BP-COX16A0A087WUM0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SYNJ2BP-COX16A0A087WUM0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SYNJ2BP-COX16A0A087WUM0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
SYNJ2BP-COX16A0A087WUM0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SYNJ2BP-COX16A0A087WUM0 AC022211.4-201ENST00000625094 2161 ntBASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms