Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 WDR20-213ENST00000557485 491 ntTSL 317.73■□□□□ 0.439e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.729e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-216ENST00000558567 586 ntTSL 5 BASIC9.96□□□□□ -0.829e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-220ENST00000561154 541 ntTSL 49.95□□□□□ -0.829e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-210ENST00000556511 2117 ntTSL 1 (best) BASIC9.83□□□□□ -0.849e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC9.32□□□□□ -0.929e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-207ENST00000555879 2175 ntTSL 29.28□□□□□ -0.929e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC8.85□□□□□ -0.999e-7■□□□□ 9.2
CSTF2TQ9H0L4 WDR20-212ENST00000557186 631 ntTSL 38.21□□□□□ -1.19e-7■□□□□ 9.2
CSTF2TQ9H0L4 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC9.02□□□□□ -0.962e-8■□□□□ 9.2
CSTF2TQ9H0L4 KMT5A-206ENST00000462311 747 ntTSL 519.54■□□□□ 0.725e-8■□□□□ 9.2
CSTF2TQ9H0L4 PRKACA-204ENST00000587372 824 ntTSL 312.84□□□□□ -0.357e-16■□□□□ 9.2
CSTF2TQ9H0L4 SPIRE2-206ENST00000564878 663 ntTSL 316.91■□□□□ 0.34e-8■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-218ENST00000566180 814 ntTSL 519.99■□□□□ 0.791e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.671e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-212ENST00000564822 314 ntTSL 419.24■□□□□ 0.671e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-226ENST00000570051 735 ntTSL 219.24■□□□□ 0.671e-6■□□□□ 9.2
CSTF2TQ9H0L4 TGIF1-220ENST00000551557 319 ntTSL 318.58■□□□□ 0.561e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-210ENST00000564601 903 ntTSL 318.06■□□□□ 0.481e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.311e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.84■□□□□ 0.291e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.43■□□□□ 0.221e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-204ENST00000561518 1092 ntTSL 516.03■□□□□ 0.161e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.01■□□□□ 0.151e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.061e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-209ENST00000564311 870 ntTSL 514.41□□□□□ -0.11e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.131e-6■□□□□ 9.2
CSTF2TQ9H0L4 CTIF-205ENST00000587860 2940 ntTSL 214.13□□□□□ -0.151e-6■□□□□ 9.2
CSTF2TQ9H0L4 RNPS1-207ENST00000562690 582 ntTSL 213.98□□□□□ -0.171e-6■□□□□ 9.2
CSTF2TQ9H0L4 AP002495.1-202ENST00000528511 933 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.771e-6■□□□□ 9.2
CSTF2TQ9H0L4 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.891e-6■□□□□ 9.2
CSTF2TQ9H0L4 AP002495.1-201ENST00000532852 754 ntAPPRIS ALT2 TSL 36.66□□□□□ -1.341e-6■□□□□ 9.2
CSTF2TQ9H0L4 FUOM-205ENST00000465384 867 ntTSL 218.72■□□□□ 0.599e-9■□□□□ 9.2
CSTF2TQ9H0L4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.13■□□□□ 0.499e-9■□□□□ 9.2
CSTF2TQ9H0L4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.349e-9■□□□□ 9.2
CSTF2TQ9H0L4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.46■□□□□ 0.239e-9■□□□□ 9.2
CSTF2TQ9H0L4 FUOM-204ENST00000447176 590 ntTSL 213.57□□□□□ -0.249e-9■□□□□ 9.2
CSTF2TQ9H0L4 RABGEF1-204ENST00000442563 553 ntTSL 415.68■□□□□ 0.12e-7■□□□□ 9.2
CSTF2TQ9H0L4 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.472e-7■□□□□ 9.2
CSTF2TQ9H0L4 RABGEF1-208ENST00000510829 3553 ntTSL 5 BASIC9.9□□□□□ -0.822e-7■□□□□ 9.2
CSTF2TQ9H0L4 RABGEF1-205ENST00000450873 2281 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.842e-7■□□□□ 9.2
CSTF2TQ9H0L4 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.082e-7■□□□□ 9.2
CSTF2TQ9H0L4 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.75□□□□□ -0.379e-8■□□□□ 9.2
CSTF2TQ9H0L4 AC010326.4-201ENST00000604665 891 ntBASIC11.99□□□□□ -0.494e-13■□□□□ 9.2
CSTF2TQ9H0L4 AC010326.4-202ENST00000603829 541 ntBASIC11.44□□□□□ -0.584e-13■□□□□ 9.2
CSTF2TQ9H0L4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-6■□□□□ 9.2
CSTF2TQ9H0L4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.382e-6■□□□□ 9.2
CSTF2TQ9H0L4 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.694e-9■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-214ENST00000590776 1483 nt17.7■□□□□ 0.422e-6■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.12e-6■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-212ENST00000588065 571 ntTSL 413.91□□□□□ -0.182e-6■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-6■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.1□□□□□ -0.472e-6■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.582e-6■□□□□ 9.2
CSTF2TQ9H0L4 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC10.3□□□□□ -0.762e-6■□□□□ 9.2
CSTF2TQ9H0L4 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.542e-7■□□□□ 9.2
CSTF2TQ9H0L4 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.72□□□□□ -1.171e-323■□□□□ 9.2
CSTF2TQ9H0L4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.132e-6■□□□□ 9.2
CSTF2TQ9H0L4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.74■□□□□ 0.111e-8■□□□□ 9.2
CSTF2TQ9H0L4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.85□□□□□ -0.031e-8■□□□□ 9.2
CSTF2TQ9H0L4 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.651e-8■□□□□ 9.2
CSTF2TQ9H0L4 COMT-211ENST00000493893 354 ntTSL 313.02□□□□□ -0.331e-6■□□□□ 9.2
CSTF2TQ9H0L4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.88■□□□□ 0.612e-8■□□□□ 9.1
CSTF2TQ9H0L4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.392e-8■□□□□ 9.1
CSTF2TQ9H0L4 MZF1-205ENST00000596039 657 ntTSL 216.17■□□□□ 0.182e-8■□□□□ 9.1
CSTF2TQ9H0L4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.152e-8■□□□□ 9.1
CSTF2TQ9H0L4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.22■□□□□ 0.835e-8■□□□□ 9.1
CSTF2TQ9H0L4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.24■□□□□ 0.195e-8■□□□□ 9.1
CSTF2TQ9H0L4 SLC9A3R1-205ENST00000583369 841 ntTSL 321.82■■□□□ 1.082e-6■□□□□ 9.1
CSTF2TQ9H0L4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.652e-6■□□□□ 9.1
CSTF2TQ9H0L4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 26e-9■□□□□ 9.1
CSTF2TQ9H0L4 GPX4-205ENST00000587932 274 ntTSL 226.51■■□□□ 1.836e-8■□□□□ 9.1
CSTF2TQ9H0L4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.15■□□□□ 0.824e-6■□□□□ 9.1
CSTF2TQ9H0L4 UBA1-206ENST00000442035 1054 ntTSL 519.93■□□□□ 0.786e-8■□□□□ 9.1
CSTF2TQ9H0L4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.2■□□□□ 0.664e-6■□□□□ 9.1
CSTF2TQ9H0L4 BRD2-216ENST00000581002 550 ntTSL 419.07■□□□□ 0.644e-6■□□□□ 9.1
CSTF2TQ9H0L4 BRD2-217ENST00000584808 547 ntTSL 419.07■□□□□ 0.644e-6■□□□□ 9.1
CSTF2TQ9H0L4 AP006621.3-201ENST00000526588 291 ntTSL 218.84■□□□□ 0.613e-6■□□□□ 9.1
CSTF2TQ9H0L4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.63■□□□□ 0.576e-8■□□□□ 9.1
CSTF2TQ9H0L4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.512e-14■□□□□ 9.1
CSTF2TQ9H0L4 C19orf48-207ENST00000596655 1639 ntTSL 217.32■□□□□ 0.366e-8■□□□□ 9.1
CSTF2TQ9H0L4 BRD2-215ENST00000580234 718 ntTSL 417.17■□□□□ 0.344e-6■□□□□ 9.1
CSTF2TQ9H0L4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.326e-8■□□□□ 9.1
CSTF2TQ9H0L4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.244e-6■□□□□ 9.1
CSTF2TQ9H0L4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.234e-6■□□□□ 9.1
CSTF2TQ9H0L4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.42■□□□□ 0.222e-8■□□□□ 9.1
CSTF2TQ9H0L4 C19orf48-216ENST00000641834 1718 nt16.26■□□□□ 0.196e-8■□□□□ 9.1
CSTF2TQ9H0L4 UBA1-208ENST00000457753 809 ntTSL 516.26■□□□□ 0.196e-8■□□□□ 9.1
CSTF2TQ9H0L4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.194e-6■□□□□ 9.1
CSTF2TQ9H0L4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.182e-8■□□□□ 9.1
CSTF2TQ9H0L4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.172e-14■□□□□ 9.1
CSTF2TQ9H0L4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.132e-8■□□□□ 9.1
CSTF2TQ9H0L4 RIPOR3-206ENST00000488529 953 ntTSL 515.82■□□□□ 0.124e-6■□□□□ 9.1
CSTF2TQ9H0L4 PLK1-209ENST00000570220 910 ntTSL 315.59■□□□□ 0.094e-6■□□□□ 9.1
CSTF2TQ9H0L4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-6■□□□□ 9.1
CSTF2TQ9H0L4 RIPOR3-205ENST00000482129 811 ntTSL 314.81□□□□□ -0.044e-6■□□□□ 9.1
CSTF2TQ9H0L4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.046e-8■□□□□ 9.1
CSTF2TQ9H0L4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.064e-6■□□□□ 9.1
CSTF2TQ9H0L4 PLK1-204ENST00000564202 584 ntTSL 314.5□□□□□ -0.094e-6■□□□□ 9.1
Retrieved 100 of 19,151 protein–RNA pairs in 409 ms