RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
C19orf48-207ENST00000596655 CCDC180Q9P1Z9 1646 aa40.53■■■■■ 4.08
C19orf48-207ENST00000596655 ABCC9O60706 1549 aa39.84■■■■□ 3.97
C19orf48-207ENST00000596655 RB1CC1Q8TDY2 1594 aa38.22■■■■□ 3.71
C19orf48-207ENST00000596655 NACADO15069 1562 aa38.1■■■■□ 3.69
C19orf48-207ENST00000596655 DCAF8L2P0C7V8 631 aa37.99■■■■□ 3.67
C19orf48-207ENST00000596655 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
C19orf48-207ENST00000596655 MYO15BQ96JP2 1530 aa37.78■■■■□ 3.64
C19orf48-207ENST00000596655 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
C19orf48-207ENST00000596655 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
C19orf48-207ENST00000596655 PABPN1Q86U42 306 aaKnown RBP eCLIP37.15■■■■□ 3.54not detected■□□□□ 8.1
C19orf48-207ENST00000596655 BICRAQ9NZM4 1560 aa37.1■■■■□ 3.53
C19orf48-207ENST00000596655 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
C19orf48-207ENST00000596655 DNAJC5BQ9UF47 199 aa36.74■■■■□ 3.47
C19orf48-207ENST00000596655 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
C19orf48-207ENST00000596655 EIF4G1Q04637 1599 aaKnown RBP36.13■■■■□ 3.37
C19orf48-207ENST00000596655 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
C19orf48-207ENST00000596655 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
C19orf48-207ENST00000596655 SMARCA4P51532 1647 aa35.32■■■■□ 3.25
C19orf48-207ENST00000596655 BAZ1AQ9NRL2 1556 aaPredicted RBP35.22■■■■□ 3.23
C19orf48-207ENST00000596655 NCAPD3P42695 1498 aa35.14■■■■□ 3.22
C19orf48-207ENST00000596655 ATAD2BQ9ULI0 1458 aa35.14■■■■□ 3.22
C19orf48-207ENST00000596655 SMARCA2P51531 1590 aa35.1■■■■□ 3.21
C19orf48-207ENST00000596655 MROH2BQ7Z745 1585 aa35.01■■■■□ 3.2
C19orf48-207ENST00000596655 HMGXB3Q12766 1538 aa34.98■■■■□ 3.19
C19orf48-207ENST00000596655 PEG3Q9GZU2 1588 aa34.95■■■■□ 3.19
C19orf48-207ENST00000596655 BAZ1BQ9UIG0 1483 aaKnown RBP34.85■■■■□ 3.17
C19orf48-207ENST00000596655 WIZO95785 1651 aa34.66■■■■□ 3.14
C19orf48-207ENST00000596655 RSF1Q96T23 1441 aaPredicted RBP34.49■■■■□ 3.11
C19orf48-207ENST00000596655 NESP48681 1621 aa34.42■■■■□ 3.1
C19orf48-207ENST00000596655 ERCC6Q03468 1493 aa34.35■■■■□ 3.09
C19orf48-207ENST00000596655 LAMC3Q9Y6N6 1575 aa34.29■■■■□ 3.08
C19orf48-207ENST00000596655 TOP2AP11388 1531 aaKnown RBP34.24■■■■□ 3.07
C19orf48-207ENST00000596655 CADPSQ9ULU8 1353 aa34.09■■■■□ 3.05
C19orf48-207ENST00000596655 KIF21AQ7Z4S6 1674 aa34.07■■■■□ 3.04
C19orf48-207ENST00000596655 CUX2O14529 1486 aa34.05■■■■□ 3.04
C19orf48-207ENST00000596655 PDS5BQ9NTI5 1447 aa34.02■■■■□ 3.04
C19orf48-207ENST00000596655 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
C19orf48-207ENST00000596655 CFTRP13569 1480 aa33.86■■■■□ 3.01
C19orf48-207ENST00000596655 CCDC88BA6NC98 1476 aa33.82■■■■□ 3
C19orf48-207ENST00000596655 FANCD2Q9BXW9 1451 aa33.74■■■□□ 2.99
C19orf48-207ENST00000596655 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
C19orf48-207ENST00000596655 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
C19orf48-207ENST00000596655 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
C19orf48-207ENST00000596655 WDR62O43379 1518 aa33.63■■■□□ 2.97
C19orf48-207ENST00000596655 SUPT5HO00267 1087 aaKnown RBP33.61■■■□□ 2.97
C19orf48-207ENST00000596655 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
C19orf48-207ENST00000596655 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
C19orf48-207ENST00000596655 TOPBP1Q92547 1522 aa33.19■■■□□ 2.9
C19orf48-207ENST00000596655 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
C19orf48-207ENST00000596655 ABCC8Q09428 1581 aa33.12■■■□□ 2.89
C19orf48-207ENST00000596655 IFT140Q96RY7 1462 aa33■■■□□ 2.87
C19orf48-207ENST00000596655 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
C19orf48-207ENST00000596655 POLA1P09884 1462 aaPredicted RBP32.89■■■□□ 2.86
C19orf48-207ENST00000596655 TARBP1Q13395 1621 aaKnown RBP32.87■■■□□ 2.85
C19orf48-207ENST00000596655 CUX1P39880 1505 aa32.87■■■□□ 2.85
C19orf48-207ENST00000596655 EIF4G3O43432 1585 aaKnown RBP32.81■■■□□ 2.84
C19orf48-207ENST00000596655 FGD5Q6ZNL6 1462 aa32.78■■■□□ 2.84
C19orf48-207ENST00000596655 RAD54L2Q9Y4B4 1467 aa32.74■■■□□ 2.83
C19orf48-207ENST00000596655 SOGA1O94964 1423 aa32.71■■■□□ 2.83
C19orf48-207ENST00000596655 AQRO60306 1485 aaKnown RBP eCLIP32.68■■■□□ 2.82not detected■■■■□ 26.1
C19orf48-207ENST00000596655 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
C19orf48-207ENST00000596655 WDR97A6NE52 1622 aa32.58■■■□□ 2.81
C19orf48-207ENST00000596655 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
C19orf48-207ENST00000596655 OSCARQ8IYS5 282 aa32.55■■■□□ 2.8
C19orf48-207ENST00000596655 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
C19orf48-207ENST00000596655 WRNQ14191 1432 aaPredicted RBP eCLIP32.53■■■□□ 2.8
C19orf48-207ENST00000596655 TOP2BQ02880 1626 aa32.52■■■□□ 2.8
C19orf48-207ENST00000596655 SYNJ1O43426 1573 aa32.52■■■□□ 2.8
C19orf48-207ENST00000596655 CHD1O14646 1710 aa32.48■■■□□ 2.79
C19orf48-207ENST00000596655 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
C19orf48-207ENST00000596655 PBRM1Q86U86 1689 aa32.39■■■□□ 2.78
C19orf48-207ENST00000596655 SNAPC4Q5SXM2 1469 aa32.39■■■□□ 2.77
C19orf48-207ENST00000596655 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
C19orf48-207ENST00000596655 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
C19orf48-207ENST00000596655 GAPVD1Q14C86 1478 aa32.35■■■□□ 2.77
C19orf48-207ENST00000596655 MAGI1Q96QZ7 1491 aaPredicted RBP32.32■■■□□ 2.76
C19orf48-207ENST00000596655 FBLN2P98095 1184 aa32.31■■■□□ 2.76
C19orf48-207ENST00000596655 SYNJ2O15056 1496 aa32.2■■■□□ 2.74
C19orf48-207ENST00000596655 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
C19orf48-207ENST00000596655 RIMBP3CA6NJZ7 1639 aa32.16■■■□□ 2.74
C19orf48-207ENST00000596655 RIMBP3BA6NNM3 1639 aa32.16■■■□□ 2.74
C19orf48-207ENST00000596655 RIMBP3Q9UFD9 1639 aa32.16■■■□□ 2.74
C19orf48-207ENST00000596655 ARHGEF11O15085 1522 aa32.1■■■□□ 2.73
C19orf48-207ENST00000596655 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
C19orf48-207ENST00000596655 ADAMTS12P58397 1594 aa32.08■■■□□ 2.73
C19orf48-207ENST00000596655 CLASP1Q7Z460 1538 aa32.06■■■□□ 2.72
C19orf48-207ENST00000596655 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
C19orf48-207ENST00000596655 GRIN2AQ12879 1464 aa31.97■■■□□ 2.71
C19orf48-207ENST00000596655 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.71
C19orf48-207ENST00000596655 CEP170Q5SW79 1584 aa31.86■■■□□ 2.69
C19orf48-207ENST00000596655 KIF27Q86VH2 1401 aa31.86■■■□□ 2.69
C19orf48-207ENST00000596655 ARAP1Q96P48 1450 aa31.83■■■□□ 2.69
C19orf48-207ENST00000596655 NUP160Q12769 1436 aa31.82■■■□□ 2.68
C19orf48-207ENST00000596655 CYB5RLQ6IPT4 315 aa31.77■■■□□ 2.68
C19orf48-207ENST00000596655 CUL7Q14999 1698 aa31.75■■■□□ 2.67
C19orf48-207ENST00000596655 IGF1RP08069 1367 aa31.74■■■□□ 2.67
C19orf48-207ENST00000596655 SHROOM2Q13796 1616 aa31.66■■■□□ 2.66
C19orf48-207ENST00000596655 RUSC2Q8N2Y8 1516 aa31.62■■■□□ 2.65
C19orf48-207ENST00000596655 ERCC6L2Q5T890 1561 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms