RNA–Protein interactions for RNA: ENST00000564601.5

RNPS1-210, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 3

Gene RNPS1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-210ENST00000564601 NISCHQ9Y2I1 1504 aa48.22■■■■■ 5.31
RNPS1-210ENST00000564601 CCDC180Q9P1Z9 1646 aa43.23■■■■■ 4.51
RNPS1-210ENST00000564601 ABCC9O60706 1549 aa42.87■■■■■ 4.45
RNPS1-210ENST00000564601 RB1CC1Q8TDY2 1594 aa40.91■■■■■ 4.14
RNPS1-210ENST00000564601 NACADO15069 1562 aa40.71■■■■■ 4.11
RNPS1-210ENST00000564601 DNAJC5BQ9UF47 199 aa40.4■■■■■ 4.06
RNPS1-210ENST00000564601 MYO15BQ96JP2 1530 aa40.28■■■■■ 4.04
RNPS1-210ENST00000564601 UNC13AQ9UPW8 1703 aa40.24■■■■■ 4.03
RNPS1-210ENST00000564601 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
RNPS1-210ENST00000564601 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4.01
RNPS1-210ENST00000564601 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
RNPS1-210ENST00000564601 PABPN1Q86U42 306 aaKnown RBP eCLIP39.87■■■■□ 3.97
RNPS1-210ENST00000564601 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
RNPS1-210ENST00000564601 SCRIBQ14160 1630 aa39.36■■■■□ 3.89
RNPS1-210ENST00000564601 SHROOM4Q9ULL8 1493 aa39.24■■■■□ 3.87
RNPS1-210ENST00000564601 CC2D2AQ9P2K1 1620 aa38.82■■■■□ 3.81
RNPS1-210ENST00000564601 EIF4G1Q04637 1599 aaKnown RBP38.8■■■■□ 3.8
RNPS1-210ENST00000564601 CECR2Q9BXF3 1484 aa38.59■■■■□ 3.77
RNPS1-210ENST00000564601 SMARCA4P51532 1647 aa37.61■■■■□ 3.61
RNPS1-210ENST00000564601 NCAPD3P42695 1498 aa37.58■■■■□ 3.61
RNPS1-210ENST00000564601 ATAD2BQ9ULI0 1458 aa37.52■■■■□ 3.6
RNPS1-210ENST00000564601 DNAJC5Q9H3Z4 198 aa37.41■■■■□ 3.58
RNPS1-210ENST00000564601 HMGXB3Q12766 1538 aa37.39■■■■□ 3.58
RNPS1-210ENST00000564601 SMARCA2P51531 1590 aa37.38■■■■□ 3.58
RNPS1-210ENST00000564601 BAZ1AQ9NRL2 1556 aaPredicted RBP37.37■■■■□ 3.57
RNPS1-210ENST00000564601 PEG3Q9GZU2 1588 aa37.27■■■■□ 3.56
RNPS1-210ENST00000564601 MROH2BQ7Z745 1585 aa37.2■■■■□ 3.55
RNPS1-210ENST00000564601 BAZ1BQ9UIG0 1483 aaKnown RBP37.11■■■■□ 3.53
RNPS1-210ENST00000564601 CUX2O14529 1486 aa36.99■■■■□ 3.51
RNPS1-210ENST00000564601 NESP48681 1621 aa36.98■■■■□ 3.51
RNPS1-210ENST00000564601 ERCC6Q03468 1493 aa36.89■■■■□ 3.5
RNPS1-210ENST00000564601 WIZO95785 1651 aa36.77■■■■□ 3.48
RNPS1-210ENST00000564601 LAMC3Q9Y6N6 1575 aa36.7■■■■□ 3.47
RNPS1-210ENST00000564601 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
RNPS1-210ENST00000564601 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
RNPS1-210ENST00000564601 RSF1Q96T23 1441 aaPredicted RBP36.45■■■■□ 3.43
RNPS1-210ENST00000564601 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
RNPS1-210ENST00000564601 PDS5BQ9NTI5 1447 aa36.35■■■■□ 3.41
RNPS1-210ENST00000564601 TOP2AP11388 1531 aaKnown RBP36.29■■■■□ 3.4
RNPS1-210ENST00000564601 MRC2Q9UBG0 1479 aa36.14■■■■□ 3.38
RNPS1-210ENST00000564601 WDR62O43379 1518 aa36.13■■■■□ 3.38
RNPS1-210ENST00000564601 CFTRP13569 1480 aa36.1■■■■□ 3.37
RNPS1-210ENST00000564601 FANCD2Q9BXW9 1451 aa36.01■■■■□ 3.36
RNPS1-210ENST00000564601 CEP164Q9UPV0 1460 aa36.01■■■■□ 3.36
RNPS1-210ENST00000564601 PRDM2Q13029 1718 aa35.89■■■■□ 3.34
RNPS1-210ENST00000564601 CCDC88BA6NC98 1476 aa35.84■■■■□ 3.33
RNPS1-210ENST00000564601 URB2Q14146 1524 aaKnown RBP35.8■■■■□ 3.32
RNPS1-210ENST00000564601 TRIM41Q8WV44 630 aa35.54■■■■□ 3.28
RNPS1-210ENST00000564601 TOPBP1Q92547 1522 aa35.41■■■■□ 3.26
RNPS1-210ENST00000564601 DNMBPQ6XZF7 1577 aa35.31■■■■□ 3.24
RNPS1-210ENST00000564601 ZNF608Q9ULD9 1512 aaPredicted RBP35.31■■■■□ 3.24
RNPS1-210ENST00000564601 IFT140Q96RY7 1462 aa35.29■■■■□ 3.24
RNPS1-210ENST00000564601 ABCC8Q09428 1581 aa35.2■■■■□ 3.23
RNPS1-210ENST00000564601 TARBP1Q13395 1621 aaKnown RBP35.17■■■■□ 3.22
RNPS1-210ENST00000564601 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
RNPS1-210ENST00000564601 OSCARQ8IYS5 282 aa35.1■■■■□ 3.21
RNPS1-210ENST00000564601 POLA1P09884 1462 aaPredicted RBP35.07■■■■□ 3.2
RNPS1-210ENST00000564601 CUX1P39880 1505 aa34.94■■■■□ 3.18
RNPS1-210ENST00000564601 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.183e-7■■■■□ 23.4
RNPS1-210ENST00000564601 RAD54L2Q9Y4B4 1467 aa34.91■■■■□ 3.18
RNPS1-210ENST00000564601 RIMBP3CA6NJZ7 1639 aa34.88■■■■□ 3.17
RNPS1-210ENST00000564601 RIMBP3BA6NNM3 1639 aa34.88■■■■□ 3.17
RNPS1-210ENST00000564601 RIMBP3Q9UFD9 1639 aa34.88■■■■□ 3.17
RNPS1-210ENST00000564601 CHD1O14646 1710 aa34.86■■■■□ 3.17
RNPS1-210ENST00000564601 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
RNPS1-210ENST00000564601 WDR97A6NE52 1622 aa34.78■■■■□ 3.16
RNPS1-210ENST00000564601 SOGA1O94964 1423 aa34.78■■■■□ 3.16
RNPS1-210ENST00000564601 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
RNPS1-210ENST00000564601 TDRD9Q8NDG6 1382 aaKnown RBP34.71■■■■□ 3.15
RNPS1-210ENST00000564601 ARHGEF11O15085 1522 aa34.69■■■■□ 3.14
RNPS1-210ENST00000564601 SNAPC4Q5SXM2 1469 aa34.62■■■■□ 3.13
RNPS1-210ENST00000564601 PBRM1Q86U86 1689 aa34.54■■■■□ 3.12
RNPS1-210ENST00000564601 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
RNPS1-210ENST00000564601 GRIN2BQ13224 1484 aa34.5■■■■□ 3.11
RNPS1-210ENST00000564601 MAGI1Q96QZ7 1491 aaPredicted RBP34.5■■■■□ 3.11
RNPS1-210ENST00000564601 ABCA10Q8WWZ4 1543 aa34.49■■■■□ 3.11
RNPS1-210ENST00000564601 CLASP1Q7Z460 1538 aa34.48■■■■□ 3.11
RNPS1-210ENST00000564601 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
RNPS1-210ENST00000564601 SYNJ1O43426 1573 aa34.44■■■■□ 3.1
RNPS1-210ENST00000564601 TOP2BQ02880 1626 aa34.42■■■■□ 3.1
RNPS1-210ENST00000564601 FBLN2P98095 1184 aa34.42■■■■□ 3.1
RNPS1-210ENST00000564601 GAPVD1Q14C86 1478 aa34.41■■■■□ 3.1
RNPS1-210ENST00000564601 ARAP1Q96P48 1450 aa34.4■■■■□ 3.1
RNPS1-210ENST00000564601 SYNJ2O15056 1496 aa34.38■■■■□ 3.09
RNPS1-210ENST00000564601 CYB5RLQ6IPT4 315 aa34.32■■■■□ 3.08
RNPS1-210ENST00000564601 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
RNPS1-210ENST00000564601 CHMP7Q8WUX9 453 aaPredicted RBP34.23■■■■□ 3.07
RNPS1-210ENST00000564601 ADAMTS12P58397 1594 aa34.22■■■■□ 3.07
RNPS1-210ENST00000564601 GRIN2AQ12879 1464 aa34.11■■■■□ 3.05
RNPS1-210ENST00000564601 CEP170Q5SW79 1584 aa34.07■■■■□ 3.05
RNPS1-210ENST00000564601 TRHP20396 242 aaPredicted RBP34.06■■■■□ 3.04
RNPS1-210ENST00000564601 ERICH3Q5RHP9 1530 aa34.04■■■■□ 3.04
RNPS1-210ENST00000564601 NUP160Q12769 1436 aa34.02■■■■□ 3.04
RNPS1-210ENST00000564601 ERCC6L2Q5T890 1561 aa33.98■■■■□ 3.03
RNPS1-210ENST00000564601 FHAD1B1AJZ9 1412 aa33.97■■■■□ 3.03
RNPS1-210ENST00000564601 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
RNPS1-210ENST00000564601 RUSC2Q8N2Y8 1516 aa33.75■■■□□ 2.99
RNPS1-210ENST00000564601 CUL7Q14999 1698 aa33.61■■■□□ 2.97
RNPS1-210ENST00000564601 IGF1RP08069 1367 aa33.61■■■□□ 2.97
RNPS1-210ENST00000564601 KIF27Q86VH2 1401 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms