RNA–Protein interactions for RNA: ENST00000564311.5

RNPS1-209, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 5

Gene RNPS1, Length 870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-209ENST00000564311 NISCHQ9Y2I1 1504 aa37.98■■■■□ 3.67
RNPS1-209ENST00000564311 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
RNPS1-209ENST00000564311 ABCC9O60706 1549 aa33.4■■■□□ 2.94
RNPS1-209ENST00000564311 RB1CC1Q8TDY2 1594 aa31.98■■■□□ 2.71
RNPS1-209ENST00000564311 NACADO15069 1562 aa31.9■■■□□ 2.7
RNPS1-209ENST00000564311 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
RNPS1-209ENST00000564311 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
RNPS1-209ENST00000564311 ZCCHC6Q5VYS8 1495 aaKnown RBP31.59■■■□□ 2.65
RNPS1-209ENST00000564311 DCAF1Q9Y4B6 1507 aa31.42■■■□□ 2.62
RNPS1-209ENST00000564311 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
RNPS1-209ENST00000564311 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
RNPS1-209ENST00000564311 BICRAQ9NZM4 1560 aa31.07■■■□□ 2.56
RNPS1-209ENST00000564311 DNAJC5BQ9UF47 199 aa30.98■■■□□ 2.55
RNPS1-209ENST00000564311 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
RNPS1-209ENST00000564311 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
RNPS1-209ENST00000564311 EIF4G1Q04637 1599 aaKnown RBP30.25■■■□□ 2.43
RNPS1-209ENST00000564311 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
RNPS1-209ENST00000564311 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
RNPS1-209ENST00000564311 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
RNPS1-209ENST00000564311 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
RNPS1-209ENST00000564311 ATAD2BQ9ULI0 1458 aa29.46■■■□□ 2.31
RNPS1-209ENST00000564311 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
RNPS1-209ENST00000564311 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
RNPS1-209ENST00000564311 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
RNPS1-209ENST00000564311 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
RNPS1-209ENST00000564311 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
RNPS1-209ENST00000564311 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
RNPS1-209ENST00000564311 WIZO95785 1651 aa28.89■■■□□ 2.22
RNPS1-209ENST00000564311 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
RNPS1-209ENST00000564311 NESP48681 1621 aa28.83■■■□□ 2.21
RNPS1-209ENST00000564311 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
RNPS1-209ENST00000564311 LAMC3Q9Y6N6 1575 aa28.69■■■□□ 2.18
RNPS1-209ENST00000564311 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
RNPS1-209ENST00000564311 CUX2O14529 1486 aa28.6■■■□□ 2.17
RNPS1-209ENST00000564311 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
RNPS1-209ENST00000564311 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
RNPS1-209ENST00000564311 THOC2Q8NI27 1593 aaKnown RBP28.44■■■□□ 2.14
RNPS1-209ENST00000564311 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
RNPS1-209ENST00000564311 CFTRP13569 1480 aa28.38■■■□□ 2.13
RNPS1-209ENST00000564311 CCDC88BA6NC98 1476 aa28.28■■■□□ 2.12
RNPS1-209ENST00000564311 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
RNPS1-209ENST00000564311 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
RNPS1-209ENST00000564311 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
RNPS1-209ENST00000564311 WDR62O43379 1518 aa28.18■■■□□ 2.1
RNPS1-209ENST00000564311 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
RNPS1-209ENST00000564311 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
RNPS1-209ENST00000564311 URB2Q14146 1524 aaKnown RBP28■■■□□ 2.07
RNPS1-209ENST00000564311 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
RNPS1-209ENST00000564311 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
RNPS1-209ENST00000564311 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
RNPS1-209ENST00000564311 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
RNPS1-209ENST00000564311 IFT140Q96RY7 1462 aa27.65■■■□□ 2.02
RNPS1-209ENST00000564311 ZNF608Q9ULD9 1512 aaPredicted RBP27.58■■■□□ 2.01
RNPS1-209ENST00000564311 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
RNPS1-209ENST00000564311 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
RNPS1-209ENST00000564311 CUX1P39880 1505 aa27.47■■□□□ 1.99
RNPS1-209ENST00000564311 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
RNPS1-209ENST00000564311 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
RNPS1-209ENST00000564311 SOGA1O94964 1423 aa27.41■■□□□ 1.98
RNPS1-209ENST00000564311 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
RNPS1-209ENST00000564311 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.972e-7■■■■□ 22.5
RNPS1-209ENST00000564311 OSCARQ8IYS5 282 aa27.37■■□□□ 1.97
RNPS1-209ENST00000564311 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
RNPS1-209ENST00000564311 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
RNPS1-209ENST00000564311 WRNQ14191 1432 aaPredicted RBP eCLIP27.18■■□□□ 1.94
RNPS1-209ENST00000564311 ABCA10Q8WWZ4 1543 aa27.15■■□□□ 1.94
RNPS1-209ENST00000564311 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
RNPS1-209ENST00000564311 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
RNPS1-209ENST00000564311 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
RNPS1-209ENST00000564311 GRIN2BQ13224 1484 aa27.11■■□□□ 1.93
RNPS1-209ENST00000564311 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
RNPS1-209ENST00000564311 CHD1O14646 1710 aa27.07■■□□□ 1.92
RNPS1-209ENST00000564311 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
RNPS1-209ENST00000564311 FBLN2P98095 1184 aa27.06■■□□□ 1.92
RNPS1-209ENST00000564311 MAGI1Q96QZ7 1491 aaPredicted RBP27.06■■□□□ 1.92
RNPS1-209ENST00000564311 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
RNPS1-209ENST00000564311 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
RNPS1-209ENST00000564311 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
RNPS1-209ENST00000564311 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
RNPS1-209ENST00000564311 PBRM1Q86U86 1689 aa26.95■■□□□ 1.91
RNPS1-209ENST00000564311 ARHGEF11O15085 1522 aa26.93■■□□□ 1.9
RNPS1-209ENST00000564311 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
RNPS1-209ENST00000564311 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
RNPS1-209ENST00000564311 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
RNPS1-209ENST00000564311 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
RNPS1-209ENST00000564311 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
RNPS1-209ENST00000564311 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
RNPS1-209ENST00000564311 GRIN2AQ12879 1464 aa26.76■■□□□ 1.87
RNPS1-209ENST00000564311 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
RNPS1-209ENST00000564311 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
RNPS1-209ENST00000564311 CYB5RLQ6IPT4 315 aa26.7■■□□□ 1.86
RNPS1-209ENST00000564311 NUP160Q12769 1436 aa26.69■■□□□ 1.86
RNPS1-209ENST00000564311 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
RNPS1-209ENST00000564311 KIF27Q86VH2 1401 aa26.63■■□□□ 1.85
RNPS1-209ENST00000564311 IGF1RP08069 1367 aa26.6■■□□□ 1.85
RNPS1-209ENST00000564311 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
RNPS1-209ENST00000564311 ERCC6L2Q5T890 1561 aa26.46■■□□□ 1.83
RNPS1-209ENST00000564311 CUL7Q14999 1698 aa26.45■■□□□ 1.82
RNPS1-209ENST00000564311 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
RNPS1-209ENST00000564311 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms