Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.99■□□□□ 0.79
ALX4Q9H161 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.99■□□□□ 0.79
ALX4Q9H161 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALX4Q9H161 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.98■□□□□ 0.79
ALX4Q9H161 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.98■□□□□ 0.79
ALX4Q9H161 DUX4L11-201ENST00000611504 1267 ntBASIC19.98■□□□□ 0.79
ALX4Q9H161 DUX4L12-201ENST00000614593 1267 ntBASIC19.98■□□□□ 0.79
ALX4Q9H161 DUX4L14-201ENST00000621227 1267 ntBASIC19.98■□□□□ 0.79
ALX4Q9H161 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALX4Q9H161 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.98■□□□□ 0.79
ALX4Q9H161 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALX4Q9H161 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ALX4Q9H161 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ALX4Q9H161 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALX4Q9H161 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALX4Q9H161 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ALX4Q9H161 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALX4Q9H161 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ALX4Q9H161 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.96■□□□□ 0.79
ALX4Q9H161 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALX4Q9H161 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ALX4Q9H161 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ALX4Q9H161 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ALX4Q9H161 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALX4Q9H161 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALX4Q9H161 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALX4Q9H161 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALX4Q9H161 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ALX4Q9H161 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALX4Q9H161 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
ALX4Q9H161 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALX4Q9H161 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ALX4Q9H161 SLC6A10P-202ENST00000431994 2058 ntBASIC19.92■□□□□ 0.78
ALX4Q9H161 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.92■□□□□ 0.78
ALX4Q9H161 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALX4Q9H161 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.92■□□□□ 0.78
ALX4Q9H161 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.92■□□□□ 0.78
ALX4Q9H161 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.91■□□□□ 0.78
ALX4Q9H161 HLA-V-202ENST00000446817 847 ntBASIC19.91■□□□□ 0.78
ALX4Q9H161 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.91■□□□□ 0.78
ALX4Q9H161 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.91■□□□□ 0.78
ALX4Q9H161 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX4Q9H161 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ALX4Q9H161 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ALX4Q9H161 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX4Q9H161 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.9■□□□□ 0.78
ALX4Q9H161 CR559946.2-201ENST00000623684 991 ntBASIC19.9■□□□□ 0.78
ALX4Q9H161 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX4Q9H161 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX4Q9H161 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALX4Q9H161 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX4Q9H161 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX4Q9H161 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ALX4Q9H161 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX4Q9H161 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALX4Q9H161 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALX4Q9H161 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.89■□□□□ 0.77
ALX4Q9H161 AC016575.1-201ENST00000607026 382 ntBASIC19.89■□□□□ 0.77
ALX4Q9H161 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.89■□□□□ 0.77
ALX4Q9H161 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.89■□□□□ 0.77
ALX4Q9H161 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
ALX4Q9H161 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ALX4Q9H161 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.88■□□□□ 0.77
ALX4Q9H161 MIR3648-2-201ENST00000581792 180 ntBASIC19.88■□□□□ 0.77
ALX4Q9H161 MIR3648-1-201ENST00000615959 180 ntBASIC19.88■□□□□ 0.77
ALX4Q9H161 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.88■□□□□ 0.77
ALX4Q9H161 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX4Q9H161 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.87■□□□□ 0.77
ALX4Q9H161 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms