Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 AC103724.3-201ENST00000564481 992 ntBASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 AL031848.2-201ENST00000607670 837 ntBASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSBP3Q9BWW4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSBP3Q9BWW4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SSBP3Q9BWW4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSBP3Q9BWW4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.75■□□□□ 0.75
SSBP3Q9BWW4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 AL035685.1-201ENST00000636663 812 ntBASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSBP3Q9BWW4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSBP3Q9BWW4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 ERN1-208ENST00000606895 2068 ntBASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SSBP3Q9BWW4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 AC092803.2-201ENST00000564287 1899 ntBASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSBP3Q9BWW4 AL592295.1-201ENST00000400984 884 ntBASIC19.7■□□□□ 0.74
SSBP3Q9BWW4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSBP3Q9BWW4 AC009299.2-201ENST00000482477 511 ntBASIC19.7■□□□□ 0.74
SSBP3Q9BWW4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SSBP3Q9BWW4 AC010501.1-201ENST00000606270 1962 ntBASIC19.7■□□□□ 0.74
SSBP3Q9BWW4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSBP3Q9BWW4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSBP3Q9BWW4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSBP3Q9BWW4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 AC096887.2-201ENST00000623443 1957 ntBASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSBP3Q9BWW4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSBP3Q9BWW4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSBP3Q9BWW4 THA1P-201ENST00000590384 1145 ntBASIC19.66■□□□□ 0.74
SSBP3Q9BWW4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSBP3Q9BWW4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSBP3Q9BWW4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSBP3Q9BWW4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms