Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 DUX4L9-201ENST00000449051 1259 ntBASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 AC129492.7-201ENST00000622992 756 ntBASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIMC1Q8NDZ2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIMC1Q8NDZ2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 AC097639.1-201ENST00000565519 1891 ntBASIC22.28■■□□□ 1.16
SIMC1Q8NDZ2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIMC1Q8NDZ2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIMC1Q8NDZ2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
SIMC1Q8NDZ2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SIMC1Q8NDZ2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.26■■□□□ 1.15
SIMC1Q8NDZ2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIMC1Q8NDZ2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.26■■□□□ 1.15
SIMC1Q8NDZ2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.25■■□□□ 1.15
SIMC1Q8NDZ2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SIMC1Q8NDZ2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIMC1Q8NDZ2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SIMC1Q8NDZ2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
SIMC1Q8NDZ2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIMC1Q8NDZ2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.24■■□□□ 1.15
SIMC1Q8NDZ2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.24■■□□□ 1.15
SIMC1Q8NDZ2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIMC1Q8NDZ2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.24■■□□□ 1.15
SIMC1Q8NDZ2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SIMC1Q8NDZ2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIMC1Q8NDZ2 AC093323.1-202ENST00000635031 2045 ntBASIC22.23■■□□□ 1.15
SIMC1Q8NDZ2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIMC1Q8NDZ2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIMC1Q8NDZ2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIMC1Q8NDZ2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.22■■□□□ 1.15
SIMC1Q8NDZ2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIMC1Q8NDZ2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIMC1Q8NDZ2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIMC1Q8NDZ2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.22■■□□□ 1.15
SIMC1Q8NDZ2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 DUX4L18-201ENST00000553347 1267 ntBASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 SLC6A10P-202ENST00000431994 2058 ntBASIC22.21■■□□□ 1.15
SIMC1Q8NDZ2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SIMC1Q8NDZ2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SIMC1Q8NDZ2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 AC018755.3-202ENST00000596210 929 ntBASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.2■■□□□ 1.14
SIMC1Q8NDZ2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SIMC1Q8NDZ2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 AC004987.1-201ENST00000428627 508 ntBASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 MIR6765-201ENST00000614092 87 ntBASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 AC022211.4-201ENST00000625094 2161 ntBASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIMC1Q8NDZ2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIMC1Q8NDZ2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SIMC1Q8NDZ2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIMC1Q8NDZ2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms