Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71LQ8N9Z2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L13-201ENST00000554103 1267 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L15-201ENST00000611059 1267 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L23-201ENST00000615195 1269 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L24-201ENST00000617576 1269 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L22-201ENST00000618238 1269 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L20-201ENST00000619712 1269 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L21-201ENST00000622058 1269 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L10-201ENST00000622460 1267 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 DUX4L25-201ENST00000624915 1269 ntBASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71LQ8N9Z2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 AC133561.1-201ENST00000568600 2415 ntBASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC71LQ8N9Z2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC71LQ8N9Z2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC71LQ8N9Z2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC71LQ8N9Z2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71LQ8N9Z2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC71LQ8N9Z2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC71LQ8N9Z2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms