Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPSF7Q8N684 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CPSF7Q8N684 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CPSF7Q8N684 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CPSF7Q8N684 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CPSF7Q8N684 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF7Q8N684 MIR219A2-201ENST00000608502 1504 ntBASIC23.13■■□□□ 1.29
CPSF7Q8N684 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPSF7Q8N684 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CPSF7Q8N684 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
CPSF7Q8N684 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.12■■□□□ 1.29
CPSF7Q8N684 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.12■■□□□ 1.29
CPSF7Q8N684 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPSF7Q8N684 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CPSF7Q8N684 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF7Q8N684 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.11■■□□□ 1.29
CPSF7Q8N684 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.11■■□□□ 1.29
CPSF7Q8N684 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF7Q8N684 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF7Q8N684 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF7Q8N684 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CPSF7Q8N684 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CPSF7Q8N684 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF7Q8N684 ABHD17AP5-201ENST00000580133 923 ntBASIC23.09■■□□□ 1.29
CPSF7Q8N684 AC012676.1-201ENST00000574705 1949 ntBASIC23.09■■□□□ 1.29
CPSF7Q8N684 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPSF7Q8N684 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CPSF7Q8N684 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
CPSF7Q8N684 LINC00543-201ENST00000567234 1845 ntBASIC23.08■■□□□ 1.29
CPSF7Q8N684 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.08■■□□□ 1.29
CPSF7Q8N684 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CPSF7Q8N684 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPSF7Q8N684 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPSF7Q8N684 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CPSF7Q8N684 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CPSF7Q8N684 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPSF7Q8N684 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPSF7Q8N684 AL359504.2-201ENST00000605506 1601 ntBASIC23.07■■□□□ 1.28
CPSF7Q8N684 SLC6A10P-202ENST00000431994 2058 ntBASIC23.07■■□□□ 1.28
CPSF7Q8N684 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPSF7Q8N684 AC133561.1-201ENST00000568600 2415 ntBASIC23.07■■□□□ 1.28
CPSF7Q8N684 AC097639.1-201ENST00000565519 1891 ntBASIC23.07■■□□□ 1.28
CPSF7Q8N684 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPSF7Q8N684 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.06■■□□□ 1.28
CPSF7Q8N684 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPSF7Q8N684 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPSF7Q8N684 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.06■■□□□ 1.28
CPSF7Q8N684 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CPSF7Q8N684 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPSF7Q8N684 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CPSF7Q8N684 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
CPSF7Q8N684 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.05■■□□□ 1.28
CPSF7Q8N684 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CPSF7Q8N684 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CPSF7Q8N684 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPSF7Q8N684 AC060814.1-201ENST00000554326 538 ntBASIC23.04■■□□□ 1.28
CPSF7Q8N684 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPSF7Q8N684 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPSF7Q8N684 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CPSF7Q8N684 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPSF7Q8N684 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPSF7Q8N684 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.03■■□□□ 1.28
CPSF7Q8N684 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPSF7Q8N684 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.03■■□□□ 1.28
CPSF7Q8N684 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPSF7Q8N684 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.02■■□□□ 1.28
CPSF7Q8N684 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPSF7Q8N684 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.02■■□□□ 1.28
CPSF7Q8N684 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CPSF7Q8N684 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.02■■□□□ 1.28
CPSF7Q8N684 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPSF7Q8N684 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.01■■□□□ 1.27
CPSF7Q8N684 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPSF7Q8N684 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPSF7Q8N684 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CPSF7Q8N684 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CPSF7Q8N684 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CPSF7Q8N684 AC141586.4-201ENST00000624558 1573 ntBASIC23.01■■□□□ 1.27
CPSF7Q8N684 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CPSF7Q8N684 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.01■■□□□ 1.27
CPSF7Q8N684 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms