Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDKAL1Q5VV42 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.11■■□□□ 1.77
CDKAL1Q5VV42 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDKAL1Q5VV42 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 LINC00543-201ENST00000567234 1845 ntBASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 SMPD5-203ENST00000639008 1464 ntBASIC26.1■■□□□ 1.77
CDKAL1Q5VV42 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDKAL1Q5VV42 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CDKAL1Q5VV42 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.09■■□□□ 1.77
CDKAL1Q5VV42 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CDKAL1Q5VV42 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDKAL1Q5VV42 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDKAL1Q5VV42 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDKAL1Q5VV42 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDKAL1Q5VV42 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDKAL1Q5VV42 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CDKAL1Q5VV42 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.08■■□□□ 1.77
CDKAL1Q5VV42 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.08■■□□□ 1.77
CDKAL1Q5VV42 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDKAL1Q5VV42 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.07■■□□□ 1.76
CDKAL1Q5VV42 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDKAL1Q5VV42 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CDKAL1Q5VV42 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDKAL1Q5VV42 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDKAL1Q5VV42 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDKAL1Q5VV42 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDKAL1Q5VV42 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDKAL1Q5VV42 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 MIR6089-201ENST00000616698 64 ntBASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKAL1Q5VV42 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDKAL1Q5VV42 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.01■■□□□ 1.75
CDKAL1Q5VV42 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.01■■□□□ 1.75
CDKAL1Q5VV42 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDKAL1Q5VV42 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CDKAL1Q5VV42 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CDKAL1Q5VV42 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CDKAL1Q5VV42 AC141586.4-201ENST00000624558 1573 ntBASIC26■■□□□ 1.75
CDKAL1Q5VV42 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDKAL1Q5VV42 MIR639-201ENST00000384974 98 ntBASIC26■■□□□ 1.75
CDKAL1Q5VV42 ECEL1P2-201ENST00000461596 1295 ntBASIC26■■□□□ 1.75
CDKAL1Q5VV42 MIR7108-201ENST00000614319 87 ntBASIC26■■□□□ 1.75
CDKAL1Q5VV42 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26■■□□□ 1.75
CDKAL1Q5VV42 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26■■□□□ 1.75
CDKAL1Q5VV42 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDKAL1Q5VV42 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDKAL1Q5VV42 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDKAL1Q5VV42 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.99■■□□□ 1.75
CDKAL1Q5VV42 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.99■■□□□ 1.75
CDKAL1Q5VV42 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDKAL1Q5VV42 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms