Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC36.69■■■■□ 3.46
CDC42BPAQ5VT25 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC36.69■■■■□ 3.46
CDC42BPAQ5VT25 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
CDC42BPAQ5VT25 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
CDC42BPAQ5VT25 SRR-208ENST00000576848 588 ntTSL 4 BASIC36.69■■■■□ 3.46
CDC42BPAQ5VT25 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC36.69■■■■□ 3.46
CDC42BPAQ5VT25 QDPR-206ENST00000508623 601 ntTSL 3 BASIC36.68■■■■□ 3.46
CDC42BPAQ5VT25 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC36.68■■■■□ 3.46
CDC42BPAQ5VT25 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC36.68■■■■□ 3.46
CDC42BPAQ5VT25 AL512631.2-201ENST00000604634 923 ntBASIC36.68■■■■□ 3.46
CDC42BPAQ5VT25 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC36.67■■■■□ 3.46
CDC42BPAQ5VT25 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 MIR935-201ENST00000401179 91 ntBASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
CDC42BPAQ5VT25 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC36.65■■■■□ 3.46
CDC42BPAQ5VT25 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC36.65■■■■□ 3.46
CDC42BPAQ5VT25 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC36.65■■■■□ 3.46
CDC42BPAQ5VT25 AC110285.6-201ENST00000617652 491 ntBASIC36.65■■■■□ 3.46
CDC42BPAQ5VT25 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 MIR6724-1-201ENST00000616420 92 ntBASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 MIR6724-2-201ENST00000616483 92 ntBASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 MIR6724-4-201ENST00000617390 92 ntBASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 MIR6724-3-201ENST00000622482 92 ntBASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC36.64■■■■□ 3.46
CDC42BPAQ5VT25 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC36.63■■■■□ 3.45
CDC42BPAQ5VT25 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC36.63■■■■□ 3.45
CDC42BPAQ5VT25 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
CDC42BPAQ5VT25 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC36.63■■■■□ 3.45
CDC42BPAQ5VT25 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 MIR4466-201ENST00000606121 54 ntBASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 RPP21-222ENST00000433076 577 ntTSL 2 BASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 MTDHP2-201ENST00000601468 714 ntBASIC36.62■■■■□ 3.45
CDC42BPAQ5VT25 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC36.61■■■■□ 3.45
CDC42BPAQ5VT25 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC36.61■■■■□ 3.45
CDC42BPAQ5VT25 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC36.61■■■■□ 3.45
CDC42BPAQ5VT25 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC36.61■■■■□ 3.45
CDC42BPAQ5VT25 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC36.61■■■■□ 3.45
CDC42BPAQ5VT25 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC36.6■■■■□ 3.45
CDC42BPAQ5VT25 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 LSM4-201ENST00000252816 986 ntTSL 2 BASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 AL136116.3-201ENST00000402907 1138 ntBASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC36.59■■■■□ 3.45
CDC42BPAQ5VT25 SNAI3-AS1-204ENST00000567997 2048 ntBASIC36.58■■■■□ 3.45
CDC42BPAQ5VT25 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPAQ5VT25 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC36.58■■■■□ 3.45
CDC42BPAQ5VT25 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPAQ5VT25 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPAQ5VT25 MIR3621-201ENST00000580529 85 ntBASIC36.57■■■■□ 3.45
CDC42BPAQ5VT25 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 AF131216.4-201ENST00000638924 1588 ntBASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 AC010997.5-201ENST00000609182 354 ntBASIC36.56■■■■□ 3.44
CDC42BPAQ5VT25 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC36.55■■■■□ 3.44
CDC42BPAQ5VT25 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
CDC42BPAQ5VT25 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC36.55■■■■□ 3.44
CDC42BPAQ5VT25 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
CDC42BPAQ5VT25 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.54■■■■□ 3.44
CDC42BPAQ5VT25 AL139246.5-201ENST00000606645 996 ntBASIC36.54■■■■□ 3.44
CDC42BPAQ5VT25 GAK-223ENST00000628912 497 ntTSL 5 BASIC36.54■■■■□ 3.44
CDC42BPAQ5VT25 EXOG-217ENST00000630638 197 ntTSL 5 BASIC36.54■■■■□ 3.44
CDC42BPAQ5VT25 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
CDC42BPAQ5VT25 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC36.53■■■■□ 3.44
CDC42BPAQ5VT25 RALB-208ENST00000631312 311 ntTSL 5 BASIC36.53■■■■□ 3.44
CDC42BPAQ5VT25 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC36.53■■■■□ 3.44
CDC42BPAQ5VT25 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
CDC42BPAQ5VT25 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC36.52■■■■□ 3.44
CDC42BPAQ5VT25 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC36.51■■■■□ 3.44
CDC42BPAQ5VT25 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
CDC42BPAQ5VT25 SHF-208ENST00000560734 1731 ntTSL 3 BASIC36.51■■■■□ 3.44
CDC42BPAQ5VT25 RASSF1-AS1-201ENST00000629828 790 ntBASIC36.51■■■■□ 3.43
CDC42BPAQ5VT25 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
CDC42BPAQ5VT25 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC36.5■■■■□ 3.43
CDC42BPAQ5VT25 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC36.5■■■■□ 3.43
CDC42BPAQ5VT25 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
CDC42BPAQ5VT25 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CDC42BPAQ5VT25 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
CDC42BPAQ5VT25 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC36.49■■■■□ 3.43
CDC42BPAQ5VT25 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CDC42BPAQ5VT25 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 NALT1-201ENST00000429224 738 ntTSL 5 BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC36.48■■■■□ 3.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms