Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.31■□□□□ 0.84
EFNB3Q15768 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
EFNB3Q15768 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.31■□□□□ 0.84
EFNB3Q15768 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
EFNB3Q15768 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFNB3Q15768 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFNB3Q15768 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.3■□□□□ 0.84
EFNB3Q15768 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFNB3Q15768 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.3■□□□□ 0.84
EFNB3Q15768 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.3■□□□□ 0.84
EFNB3Q15768 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EFNB3Q15768 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.3■□□□□ 0.84
EFNB3Q15768 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EFNB3Q15768 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFNB3Q15768 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.29■□□□□ 0.84
EFNB3Q15768 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFNB3Q15768 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFNB3Q15768 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFNB3Q15768 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.29■□□□□ 0.84
EFNB3Q15768 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFNB3Q15768 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFNB3Q15768 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
EFNB3Q15768 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
EFNB3Q15768 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFNB3Q15768 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFNB3Q15768 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFNB3Q15768 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFNB3Q15768 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EFNB3Q15768 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EFNB3Q15768 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.28■□□□□ 0.84
EFNB3Q15768 Z92544.1-202ENST00000571933 1220 ntBASIC20.28■□□□□ 0.84
EFNB3Q15768 THA1P-201ENST00000590384 1145 ntBASIC20.28■□□□□ 0.84
EFNB3Q15768 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EFNB3Q15768 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.27■□□□□ 0.84
EFNB3Q15768 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.27■□□□□ 0.84
EFNB3Q15768 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFNB3Q15768 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.27■□□□□ 0.84
EFNB3Q15768 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.27■□□□□ 0.84
EFNB3Q15768 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.27■□□□□ 0.84
EFNB3Q15768 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EFNB3Q15768 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.26■□□□□ 0.83
EFNB3Q15768 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
EFNB3Q15768 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 AC120024.1-201ENST00000562672 995 ntBASIC20.26■□□□□ 0.83
EFNB3Q15768 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFNB3Q15768 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFNB3Q15768 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.25■□□□□ 0.83
EFNB3Q15768 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.25■□□□□ 0.83
EFNB3Q15768 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EFNB3Q15768 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.25■□□□□ 0.83
EFNB3Q15768 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EFNB3Q15768 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EFNB3Q15768 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.24■□□□□ 0.83
EFNB3Q15768 GUSBP5-201ENST00000418136 578 ntBASIC20.24■□□□□ 0.83
EFNB3Q15768 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.24■□□□□ 0.83
EFNB3Q15768 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFNB3Q15768 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFNB3Q15768 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFNB3Q15768 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
EFNB3Q15768 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFNB3Q15768 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
EFNB3Q15768 AC011551.1-201ENST00000614101 683 ntBASIC20.23■□□□□ 0.83
EFNB3Q15768 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFNB3Q15768 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFNB3Q15768 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFNB3Q15768 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.22■□□□□ 0.83
EFNB3Q15768 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFNB3Q15768 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
EFNB3Q15768 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.22■□□□□ 0.83
EFNB3Q15768 AC010501.1-201ENST00000606270 1962 ntBASIC20.22■□□□□ 0.83
EFNB3Q15768 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
EFNB3Q15768 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFNB3Q15768 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFNB3Q15768 BX664725.1-201ENST00000438252 379 ntBASIC20.21■□□□□ 0.83
EFNB3Q15768 AC239859.2-201ENST00000444165 318 ntBASIC20.21■□□□□ 0.83
EFNB3Q15768 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.21■□□□□ 0.83
EFNB3Q15768 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.21■□□□□ 0.83
EFNB3Q15768 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.21■□□□□ 0.83
EFNB3Q15768 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.21■□□□□ 0.83
EFNB3Q15768 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.21■□□□□ 0.83
EFNB3Q15768 AC096887.2-201ENST00000623443 1957 ntBASIC20.21■□□□□ 0.83
EFNB3Q15768 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.2■□□□□ 0.82
EFNB3Q15768 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 AC137630.3-201ENST00000607245 391 ntBASIC20.2■□□□□ 0.82
EFNB3Q15768 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.2■□□□□ 0.82
EFNB3Q15768 ERN1-208ENST00000606895 2068 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms