Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
H3F3AP84243 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3F3AP84243 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3F3AP84243 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
H3F3AP84243 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3F3AP84243 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
H3F3AP84243 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3F3AP84243 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3F3AP84243 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.24■□□□□ 0.99
H3F3AP84243 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.24■□□□□ 0.99
H3F3AP84243 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
H3F3AP84243 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.24■□□□□ 0.99
H3F3AP84243 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3F3AP84243 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.24■□□□□ 0.99
H3F3AP84243 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H3F3AP84243 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3F3AP84243 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.23■□□□□ 0.99
H3F3AP84243 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.23■□□□□ 0.99
H3F3AP84243 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.23■□□□□ 0.99
H3F3AP84243 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.23■□□□□ 0.99
H3F3AP84243 AL033527.3-201ENST00000566366 1196 ntBASIC21.23■□□□□ 0.99
H3F3AP84243 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3F3AP84243 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.22■□□□□ 0.99
H3F3AP84243 LONRF2P2-201ENST00000439212 571 ntBASIC21.22■□□□□ 0.99
H3F3AP84243 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3F3AP84243 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3F3AP84243 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
H3F3AP84243 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3F3AP84243 AC019171.1-201ENST00000601251 1056 ntBASIC21.21■□□□□ 0.99
H3F3AP84243 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.21■□□□□ 0.99
H3F3AP84243 AC020928.2-201ENST00000588717 2197 ntBASIC21.21■□□□□ 0.99
H3F3AP84243 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
H3F3AP84243 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3F3AP84243 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
H3F3AP84243 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3F3AP84243 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3F3AP84243 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3F3AP84243 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.2■□□□□ 0.98
H3F3AP84243 AC074183.2-201ENST00000623112 922 ntBASIC21.2■□□□□ 0.98
H3F3AP84243 SLC6A10P-202ENST00000431994 2058 ntBASIC21.2■□□□□ 0.98
H3F3AP84243 AC135731.1-201ENST00000569415 2548 ntBASIC21.2■□□□□ 0.98
H3F3AP84243 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
H3F3AP84243 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3F3AP84243 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3F3AP84243 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3F3AP84243 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3F3AP84243 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.19■□□□□ 0.98
H3F3AP84243 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H3F3AP84243 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3F3AP84243 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.19■□□□□ 0.98
H3F3AP84243 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.18■□□□□ 0.98
H3F3AP84243 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.18■□□□□ 0.98
H3F3AP84243 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.18■□□□□ 0.98
H3F3AP84243 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3F3AP84243 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
H3F3AP84243 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H3F3AP84243 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H3F3AP84243 AC139795.1-202ENST00000500444 432 ntBASIC21.17■□□□□ 0.98
H3F3AP84243 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.17■□□□□ 0.98
H3F3AP84243 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.17■□□□□ 0.98
H3F3AP84243 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
H3F3AP84243 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H3F3AP84243 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
H3F3AP84243 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3F3AP84243 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3F3AP84243 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H3F3AP84243 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.16■□□□□ 0.98
H3F3AP84243 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3F3AP84243 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H3F3AP84243 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.16■□□□□ 0.98
H3F3AP84243 FOXO3B-201ENST00000395675 1928 ntBASIC21.16■□□□□ 0.98
H3F3AP84243 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.15■□□□□ 0.98
H3F3AP84243 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
H3F3AP84243 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.15■□□□□ 0.98
H3F3AP84243 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.15■□□□□ 0.98
H3F3AP84243 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.15■□□□□ 0.98
H3F3AP84243 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.15■□□□□ 0.98
H3F3AP84243 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3F3AP84243 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms