Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
APOC4P55056 KRT18P24-201ENST00000344739 1156 ntBASIC17.41■□□□□ 0.38
APOC4P55056 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.41■□□□□ 0.38
APOC4P55056 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC4P55056 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.41■□□□□ 0.38
APOC4P55056 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC4P55056 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC4P55056 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.4■□□□□ 0.38
APOC4P55056 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC4P55056 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
APOC4P55056 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APOC4P55056 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC4P55056 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
APOC4P55056 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
APOC4P55056 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOC4P55056 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.39■□□□□ 0.37
APOC4P55056 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.39■□□□□ 0.37
APOC4P55056 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.39■□□□□ 0.37
APOC4P55056 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.39■□□□□ 0.37
APOC4P55056 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.39■□□□□ 0.37
APOC4P55056 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOC4P55056 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOC4P55056 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOC4P55056 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOC4P55056 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.38■□□□□ 0.37
APOC4P55056 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
APOC4P55056 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
APOC4P55056 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC4P55056 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.38■□□□□ 0.37
APOC4P55056 BX664725.1-201ENST00000438252 379 ntBASIC17.38■□□□□ 0.37
APOC4P55056 KRT125P-201ENST00000546827 989 ntBASIC17.38■□□□□ 0.37
APOC4P55056 Z92544.1-202ENST00000571933 1220 ntBASIC17.38■□□□□ 0.37
APOC4P55056 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.38■□□□□ 0.37
APOC4P55056 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC4P55056 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
APOC4P55056 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC4P55056 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC4P55056 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC4P55056 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC4P55056 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC4P55056 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOC4P55056 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
APOC4P55056 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC4P55056 AL121749.1-202ENST00000609313 2153 ntBASIC17.37■□□□□ 0.37
APOC4P55056 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC4P55056 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC4P55056 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC4P55056 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC4P55056 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
APOC4P55056 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC4P55056 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
APOC4P55056 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC4P55056 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC4P55056 AC011551.1-201ENST00000614101 683 ntBASIC17.36■□□□□ 0.37
APOC4P55056 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APOC4P55056 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC4P55056 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOC4P55056 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC4P55056 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
APOC4P55056 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.35■□□□□ 0.37
APOC4P55056 AC120024.1-201ENST00000562672 995 ntBASIC17.35■□□□□ 0.37
APOC4P55056 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.35■□□□□ 0.37
APOC4P55056 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
APOC4P55056 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC4P55056 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC4P55056 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC4P55056 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APOC4P55056 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC4P55056 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
APOC4P55056 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC4P55056 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
APOC4P55056 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.34■□□□□ 0.37
APOC4P55056 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.34■□□□□ 0.37
APOC4P55056 AC097639.1-201ENST00000565519 1891 ntBASIC17.34■□□□□ 0.37
APOC4P55056 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.34■□□□□ 0.37
APOC4P55056 AC010501.1-201ENST00000606270 1962 ntBASIC17.34■□□□□ 0.37
APOC4P55056 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
APOC4P55056 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
APOC4P55056 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
APOC4P55056 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
APOC4P55056 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.33■□□□□ 0.36
APOC4P55056 AC239859.2-201ENST00000444165 318 ntBASIC17.33■□□□□ 0.36
APOC4P55056 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.33■□□□□ 0.36
APOC4P55056 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
APOC4P55056 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APOC4P55056 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
APOC4P55056 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
APOC4P55056 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APOC4P55056 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.32■□□□□ 0.36
APOC4P55056 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.32■□□□□ 0.36
APOC4P55056 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
APOC4P55056 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.32■□□□□ 0.36
APOC4P55056 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOC4P55056 AC092803.2-201ENST00000564287 1899 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms