Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
HCFC1P51610 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.93■□□□□ 0.94
HCFC1P51610 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.93■□□□□ 0.94
HCFC1P51610 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HCFC1P51610 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HCFC1P51610 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HCFC1P51610 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC1P51610 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.92■□□□□ 0.94
HCFC1P51610 TSPY9P-201ENST00000440215 945 ntBASIC20.92■□□□□ 0.94
HCFC1P51610 TSPY11P-201ENST00000442607 1045 ntBASIC20.92■□□□□ 0.94
HCFC1P51610 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC1P51610 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC1P51610 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HCFC1P51610 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HCFC1P51610 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC1P51610 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCFC1P51610 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC1P51610 AC142472.1-201ENST00000612013 1741 ntBASIC20.91■□□□□ 0.94
HCFC1P51610 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC1P51610 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.91■□□□□ 0.94
HCFC1P51610 AL117332.1-201ENST00000622628 974 ntBASIC20.91■□□□□ 0.94
HCFC1P51610 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HCFC1P51610 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC1P51610 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC1P51610 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCFC1P51610 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HCFC1P51610 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.9■□□□□ 0.94
HCFC1P51610 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HCFC1P51610 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.9■□□□□ 0.94
HCFC1P51610 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.9■□□□□ 0.94
HCFC1P51610 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC1P51610 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.9■□□□□ 0.94
HCFC1P51610 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
HCFC1P51610 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.9■□□□□ 0.94
HCFC1P51610 MIR6724-1-201ENST00000616420 92 ntBASIC20.9■□□□□ 0.94
HCFC1P51610 MIR6724-2-201ENST00000616483 92 ntBASIC20.9■□□□□ 0.94
HCFC1P51610 MIR6724-4-201ENST00000617390 92 ntBASIC20.9■□□□□ 0.94
HCFC1P51610 MIR6724-3-201ENST00000622482 92 ntBASIC20.9■□□□□ 0.94
HCFC1P51610 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCFC1P51610 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.89■□□□□ 0.93
HCFC1P51610 MIR4466-201ENST00000606121 54 ntBASIC20.89■□□□□ 0.93
HCFC1P51610 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HCFC1P51610 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HCFC1P51610 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC1P51610 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.88■□□□□ 0.93
HCFC1P51610 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
HCFC1P51610 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
HCFC1P51610 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.88■□□□□ 0.93
HCFC1P51610 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.88■□□□□ 0.93
HCFC1P51610 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.88■□□□□ 0.93
HCFC1P51610 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC1P51610 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC1P51610 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
HCFC1P51610 AL136116.3-201ENST00000402907 1138 ntBASIC20.87■□□□□ 0.93
HCFC1P51610 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HCFC1P51610 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC1P51610 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.86■□□□□ 0.93
HCFC1P51610 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.86■□□□□ 0.93
HCFC1P51610 MIR3621-201ENST00000580529 85 ntBASIC20.86■□□□□ 0.93
HCFC1P51610 AL512631.2-201ENST00000604634 923 ntBASIC20.86■□□□□ 0.93
HCFC1P51610 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.86■□□□□ 0.93
HCFC1P51610 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC1P51610 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC1P51610 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.86■□□□□ 0.93
HCFC1P51610 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC1P51610 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.85■□□□□ 0.93
HCFC1P51610 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.85■□□□□ 0.93
HCFC1P51610 AL139246.5-201ENST00000606645 996 ntBASIC20.85■□□□□ 0.93
HCFC1P51610 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC1P51610 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.85■□□□□ 0.93
HCFC1P51610 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC1P51610 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC1P51610 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC1P51610 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC1P51610 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.84■□□□□ 0.93
HCFC1P51610 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC1P51610 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC1P51610 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC1P51610 AC011551.1-201ENST00000614101 683 ntBASIC20.84■□□□□ 0.93
HCFC1P51610 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.84■□□□□ 0.93
HCFC1P51610 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC1P51610 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC1P51610 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC1P51610 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC1P51610 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.83■□□□□ 0.93
HCFC1P51610 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.83■□□□□ 0.92
HCFC1P51610 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HCFC1P51610 MTDHP2-201ENST00000601468 714 ntBASIC20.83■□□□□ 0.92
HCFC1P51610 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC1P51610 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC1P51610 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.82■□□□□ 0.92
HCFC1P51610 AC010997.5-201ENST00000609182 354 ntBASIC20.82■□□□□ 0.92
HCFC1P51610 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC1P51610 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC1P51610 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.82■□□□□ 0.92
HCFC1P51610 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.82■□□□□ 0.92
HCFC1P51610 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.82■□□□□ 0.92
HCFC1P51610 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC1P51610 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC1P51610 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms