Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCT4P50991 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCT4P50991 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCT4P50991 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.12■■■□□ 2.41
CCT4P50991 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCT4P50991 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCT4P50991 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCT4P50991 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCT4P50991 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCT4P50991 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCT4P50991 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.1■■■□□ 2.41
CCT4P50991 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCT4P50991 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCT4P50991 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCT4P50991 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCT4P50991 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.09■■■□□ 2.41
CCT4P50991 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCT4P50991 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.09■■■□□ 2.41
CCT4P50991 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CCT4P50991 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CCT4P50991 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CCT4P50991 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCT4P50991 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.08■■■□□ 2.41
CCT4P50991 LONRF2P2-201ENST00000439212 571 ntBASIC30.08■■■□□ 2.41
CCT4P50991 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.08■■■□□ 2.41
CCT4P50991 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.08■■■□□ 2.41
CCT4P50991 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.08■■■□□ 2.41
CCT4P50991 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.08■■■□□ 2.41
CCT4P50991 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCT4P50991 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCT4P50991 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCT4P50991 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCT4P50991 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.08■■■□□ 2.41
CCT4P50991 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CCT4P50991 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCT4P50991 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCT4P50991 YBX1P4-201ENST00000392794 808 ntBASIC30.06■■■□□ 2.4
CCT4P50991 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCT4P50991 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.06■■■□□ 2.4
CCT4P50991 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.06■■■□□ 2.4
CCT4P50991 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CCT4P50991 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCT4P50991 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCT4P50991 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCT4P50991 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCT4P50991 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCT4P50991 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.05■■■□□ 2.4
CCT4P50991 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCT4P50991 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.05■■■□□ 2.4
CCT4P50991 MIR4508-201ENST00000584178 70 ntBASIC30.04■■■□□ 2.4
CCT4P50991 AC019171.1-201ENST00000601251 1056 ntBASIC30.04■■■□□ 2.4
CCT4P50991 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCT4P50991 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
CCT4P50991 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CCT4P50991 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.03■■■□□ 2.4
CCT4P50991 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
CCT4P50991 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CCT4P50991 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
CCT4P50991 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCT4P50991 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCT4P50991 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CCT4P50991 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCT4P50991 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.01■■■□□ 2.4
CCT4P50991 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCT4P50991 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.01■■■□□ 2.39
CCT4P50991 AC009299.2-201ENST00000482477 511 ntBASIC30.01■■■□□ 2.39
CCT4P50991 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.01■■■□□ 2.39
CCT4P50991 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCT4P50991 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.39
CCT4P50991 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
CCT4P50991 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCT4P50991 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCT4P50991 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCT4P50991 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CCT4P50991 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
CCT4P50991 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
CCT4P50991 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCT4P50991 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCT4P50991 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.97■■■□□ 2.39
CCT4P50991 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CCT4P50991 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CCT4P50991 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCT4P50991 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCT4P50991 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCT4P50991 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.96■■■□□ 2.39
CCT4P50991 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.96■■■□□ 2.39
CCT4P50991 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CCT4P50991 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
CCT4P50991 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.95■■■□□ 2.39
CCT4P50991 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
CCT4P50991 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CCT4P50991 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.95■■■□□ 2.39
CCT4P50991 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms