Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.555e-8■■■■■ 34.6
U2AF2P26368 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.555e-8■■■■■ 34.6
U2AF2P26368 EMC2-207ENST00000524143 533 ntTSL 29.88□□□□□ -0.835e-8■■■■■ 34.6
U2AF2P26368 BAIAP2L1-205ENST00000480580 689 ntTSL 49.63□□□□□ -0.875e-8■■■■■ 34.6
U2AF2P26368 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC9.29□□□□□ -0.925e-8■■■■■ 34.6
U2AF2P26368 NPM2-211ENST00000522953 373 ntTSL 38.35□□□□□ -1.075e-8■■■■■ 34.6
U2AF2P26368 LINC00969-302ENST00000628125 668 ntTSL 58.28□□□□□ -1.081e-15■■■■■ 34.6
U2AF2P26368 PNPLA8-202ENST00000415498 568 ntTSL 46.96□□□□□ -1.35e-8■■■■■ 34.6
U2AF2P26368 EMC2-203ENST00000517784 640 ntTSL 36.57□□□□□ -1.365e-8■■■■■ 34.6
U2AF2P26368 USP53-206ENST00000510737 534 ntTSL 56.4□□□□□ -1.385e-8■■■■■ 34.6
U2AF2P26368 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.24□□□□□ -1.575e-8■■■■■ 34.6
U2AF2P26368 PNPLA8-207ENST00000453085 2326 ntTSL 25.12□□□□□ -1.595e-8■■■■■ 34.6
U2AF2P26368 GTF2IP12-201ENST00000456547 356 ntBASIC2.98□□□□□ -1.935e-8■■■■■ 34.6
U2AF2P26368 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.59□□□□□ -1.995e-8■■■■■ 34.6
U2AF2P26368 EMC2-202ENST00000517593 532 ntTSL 22.12□□□□□ -2.075e-8■■■■■ 34.6
U2AF2P26368 HSF2-203ENST00000465214 642 ntTSL 22.71□□□□□ -1.981e-11■■■■■ 34.6
U2AF2P26368 TAF15-202ENST00000603346 702 ntTSL 27.74□□□□□ -1.172e-19■■■■■ 34.6
U2AF2P26368 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC14.72□□□□□ -0.051e-6■■■■■ 34.5
U2AF2P26368 CHPT1-203ENST00000546873 624 ntTSL 37.95□□□□□ -1.144e-7■■■■■ 34.5
U2AF2P26368 MORF4L2-213ENST00000488331 326 ntTSL 22.97□□□□□ -1.932e-28■■■■■ 34.5
U2AF2P26368 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.032e-12■■■■■ 34.5
U2AF2P26368 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.08■□□□□ 0.642e-11■■■■■ 34.4
U2AF2P26368 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.12■□□□□ 0.172e-11■■■■■ 34.4
U2AF2P26368 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.172e-11■■■■■ 34.4
U2AF2P26368 CAND1-204ENST00000540319 2786 ntTSL 23.9□□□□□ -1.792e-15■■■■■ 34.4
U2AF2P26368 CAND1-207ENST00000544619 4091 ntTSL 1 (best)2.67□□□□□ -1.982e-15■■■■■ 34.4
U2AF2P26368 FCGR2A-210ENST00000483665 1495 ntTSL 214.07□□□□□ -0.161e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-205ENST00000467525 1642 ntTSL 511.07□□□□□ -0.641e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.671e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -11e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-207ENST00000471026 731 ntTSL 38.68□□□□□ -1.021e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-211ENST00000486608 884 ntTSL 35.74□□□□□ -1.491e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-212ENST00000491841 730 ntTSL 35.42□□□□□ -1.541e-8■■■■■ 34.4
U2AF2P26368 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.88□□□□□ -1.791e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-204ENST00000461298 805 ntTSL 22.07□□□□□ -2.081e-8■■■■■ 34.4
U2AF2P26368 FCGR2A-203ENST00000459885 259 ntTSL 30.3□□□□□ -2.361e-8■■■■■ 34.4
U2AF2P26368 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.442e-11■■■■■ 34.4
U2AF2P26368 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.22e-11■■■■■ 34.4
U2AF2P26368 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.422e-11■■■■■ 34.4
U2AF2P26368 ZC3H7A-212ENST00000575041 780 ntTSL 511.67□□□□□ -0.541e-9■■■■■ 34.4
U2AF2P26368 ZC3H7A-207ENST00000571676 859 ntTSL 211.57□□□□□ -0.561e-9■■■■■ 34.4
U2AF2P26368 ZC3H7A-217ENST00000576247 480 ntTSL 211.57□□□□□ -0.561e-9■■■■■ 34.4
U2AF2P26368 ZC3H7A-215ENST00000576009 986 ntTSL 36.29□□□□□ -1.41e-9■■■■■ 34.4
U2AF2P26368 SFI1-201ENST00000357852 1453 ntTSL 1 (best)20.87■□□□□ 0.935e-9■■■■■ 34.4
U2AF2P26368 SFI1-206ENST00000417682 1817 ntTSL 519.69■□□□□ 0.745e-9■■■■■ 34.4
U2AF2P26368 SFI1-221ENST00000476577 1485 ntTSL 1 (best)19.28■□□□□ 0.685e-9■■■■■ 34.4
U2AF2P26368 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.19■□□□□ 0.55e-9■■■■■ 34.4
U2AF2P26368 SFI1-212ENST00000452250 2625 ntTSL 217.67■□□□□ 0.425e-9■■■■■ 34.4
U2AF2P26368 SFI1-214ENST00000464333 3019 ntTSL 215.92■□□□□ 0.145e-9■■■■■ 34.4
U2AF2P26368 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.135e-9■■■■■ 34.4
U2AF2P26368 SFI1-219ENST00000474741 708 ntTSL 515.8■□□□□ 0.125e-9■■■■■ 34.4
U2AF2P26368 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.125e-9■■■■■ 34.4
U2AF2P26368 SFI1-202ENST00000382162 5250 ntTSL 214.56□□□□□ -0.085e-9■■■■■ 34.4
U2AF2P26368 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.195e-9■■■■■ 34.4
U2AF2P26368 MSS51-202ENST00000372912 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.315e-9■■■■■ 34.4
U2AF2P26368 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.345e-9■■■■■ 34.4
U2AF2P26368 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.65□□□□□ -1.185e-9■■■■■ 34.4
U2AF2P26368 WASHC4-206ENST00000548534 732 ntTSL 33.35□□□□□ -1.875e-9■■■■■ 34.4
U2AF2P26368 FMR1-214ENST00000611273 564 ntTSL 22.65□□□□□ -1.995e-9■■■■■ 34.4
U2AF2P26368 WASHC4-209ENST00000550613 467 ntTSL 42.58□□□□□ -25e-9■■■■■ 34.4
U2AF2P26368 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.552e-10■■■■■ 34.3
U2AF2P26368 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.97□□□□□ -1.132e-10■■■■■ 34.3
U2AF2P26368 TNKS-203ENST00000517770 574 ntTSL 46.11□□□□□ -1.432e-10■■■■■ 34.3
U2AF2P26368 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.121e-323■■■■■ 34.3
U2AF2P26368 C16orf70-211ENST00000569914 768 ntTSL 319.4■□□□□ 0.72e-11■■■■■ 34.3
U2AF2P26368 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.09■■□□□ 1.611e-7■■■■■ 34.2
U2AF2P26368 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.184e-12■■■■■ 34.2
U2AF2P26368 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.233e-9■■■■■ 34.2
U2AF2P26368 PHF21A-207ENST00000527401 8954 ntTSL 212.48□□□□□ -0.413e-9■■■■■ 34.2
U2AF2P26368 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC10.11□□□□□ -0.793e-9■■■■■ 34.2
U2AF2P26368 FMO5-207ENST00000533848 618 ntTSL 48.69□□□□□ -1.027e-12■■■■■ 34.2
U2AF2P26368 SMC4-221ENST00000489573 1553 ntTSL 1 (best)24.96■■□□□ 1.596e-7■■■■■ 34.1
U2AF2P26368 SMC4-209ENST00000468653 1756 ntTSL 221.91■■□□□ 1.16e-7■■■■■ 34.1
U2AF2P26368 SMC4-211ENST00000469858 1971 ntTSL 220.96■□□□□ 0.956e-7■■■■■ 34.1
U2AF2P26368 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.936e-7■■■■■ 34.1
U2AF2P26368 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.33■□□□□ 0.536e-7■■■■■ 34.1
U2AF2P26368 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.16e-7■■■■■ 34.1
U2AF2P26368 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC12.21□□□□□ -0.456e-7■■■■■ 34.1
U2AF2P26368 ATG12-212ENST00000513322 1558 ntTSL 324.4■■□□□ 1.52e-8■■■■■ 34.1
U2AF2P26368 ATG12-201ENST00000379594 1082 ntTSL 213.05□□□□□ -0.322e-8■■■■■ 34.1
U2AF2P26368 ATG12-210ENST00000513167 732 ntTSL 311.19□□□□□ -0.622e-8■■■■■ 34.1
U2AF2P26368 ATG12-204ENST00000505993 773 ntTSL 38.03□□□□□ -1.122e-8■■■■■ 34.1
U2AF2P26368 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC8.01□□□□□ -1.132e-8■■■■■ 34.1
U2AF2P26368 ATG12-207ENST00000509598 2106 ntTSL 26.64□□□□□ -1.352e-8■■■■■ 34.1
U2AF2P26368 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.532e-8■■■■■ 34.1
U2AF2P26368 ATG12-203ENST00000505252 3274 ntTSL 1 (best)5.43□□□□□ -1.542e-8■■■■■ 34.1
U2AF2P26368 ATG12-205ENST00000507793 807 ntTSL 23.72□□□□□ -1.812e-8■■■■■ 34.1
U2AF2P26368 ATG12-211ENST00000513292 692 ntTSL 33.34□□□□□ -1.872e-8■■■■■ 34.1
U2AF2P26368 ATG12-209ENST00000511984 567 ntTSL 1 (best)3.33□□□□□ -1.882e-8■■■■■ 34.1
U2AF2P26368 ATG12-206ENST00000508464 1211 ntTSL 42.81□□□□□ -1.962e-8■■■■■ 34.1
U2AF2P26368 ANKZF1-209ENST00000460966 873 ntTSL 1 (best)11.09□□□□□ -0.636e-15■■■■■ 34.1
U2AF2P26368 DGCR8-204ENST00000457069 770 ntTSL 319.18■□□□□ 0.661e-26■■■■■ 34.1
U2AF2P26368 MIR3618-201ENST00000580330 88 ntBASIC1.99□□□□□ -2.092e-26■■■■■ 34.1
U2AF2P26368 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC11.46□□□□□ -0.579e-8■■■■■ 34
U2AF2P26368 DDX46-207ENST00000507392 3565 ntTSL 29.73□□□□□ -0.859e-8■■■■■ 34
U2AF2P26368 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -19e-8■■■■■ 34
U2AF2P26368 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.363e-7■■■■■ 34
U2AF2P26368 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.693e-7■■■■■ 34
U2AF2P26368 NUP160-207ENST00000528501 1961 ntTSL 219.13■□□□□ 0.654e-13■■■■■ 34
U2AF2P26368 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.014e-9■■■■■ 34
Retrieved 100 of 36,523 protein–RNA pairs in 547 ms