RNA–Protein interactions for RNA: ENST00000400288.6

SFI1-203, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFI1, Length 4,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-203ENST00000400288 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
SFI1-203ENST00000400288 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
SFI1-203ENST00000400288 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
SFI1-203ENST00000400288 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
SFI1-203ENST00000400288 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
SFI1-203ENST00000400288 HRCP23327 699 aa18.84■□□□□ 0.61
SFI1-203ENST00000400288 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
SFI1-203ENST00000400288 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
SFI1-203ENST00000400288 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
SFI1-203ENST00000400288 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
SFI1-203ENST00000400288 ZEB1P37275 1124 aaPredicted RBP18.28■□□□□ 0.52
SFI1-203ENST00000400288 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
SFI1-203ENST00000400288 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
SFI1-203ENST00000400288 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
SFI1-203ENST00000400288 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
SFI1-203ENST00000400288 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
SFI1-203ENST00000400288 MYT1Q01538 1121 aa18.03■□□□□ 0.48
SFI1-203ENST00000400288 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
SFI1-203ENST00000400288 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
SFI1-203ENST00000400288 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.46
SFI1-203ENST00000400288 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
SFI1-203ENST00000400288 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
SFI1-203ENST00000400288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
SFI1-203ENST00000400288 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
SFI1-203ENST00000400288 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
SFI1-203ENST00000400288 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
SFI1-203ENST00000400288 APLP2Q06481 763 aa17.5■□□□□ 0.39
SFI1-203ENST00000400288 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
SFI1-203ENST00000400288 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
SFI1-203ENST00000400288 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
SFI1-203ENST00000400288 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
SFI1-203ENST00000400288 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
SFI1-203ENST00000400288 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
SFI1-203ENST00000400288 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
SFI1-203ENST00000400288 NEFLP07196 543 aa17.15■□□□□ 0.34
SFI1-203ENST00000400288 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
SFI1-203ENST00000400288 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
SFI1-203ENST00000400288 BCANQ96GW7 911 aa17.01■□□□□ 0.31
SFI1-203ENST00000400288 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
SFI1-203ENST00000400288 ITGAEP38570 1179 aa16.91■□□□□ 0.3
SFI1-203ENST00000400288 MIER1Q8N108 512 aa16.9■□□□□ 0.3
SFI1-203ENST00000400288 ABCC9O60706 1549 aa16.85■□□□□ 0.29
SFI1-203ENST00000400288 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.263e-7■■■□□ 16.2
SFI1-203ENST00000400288 FKBP8Q14318 412 aa16.65■□□□□ 0.26
SFI1-203ENST00000400288 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
SFI1-203ENST00000400288 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
SFI1-203ENST00000400288 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
SFI1-203ENST00000400288 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
SFI1-203ENST00000400288 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
SFI1-203ENST00000400288 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SFI1-203ENST00000400288 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
SFI1-203ENST00000400288 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
SFI1-203ENST00000400288 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
SFI1-203ENST00000400288 ANP32CO43423 234 aa16.47■□□□□ 0.23
SFI1-203ENST00000400288 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
SFI1-203ENST00000400288 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
SFI1-203ENST00000400288 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
SFI1-203ENST00000400288 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
SFI1-203ENST00000400288 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
SFI1-203ENST00000400288 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
SFI1-203ENST00000400288 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
SFI1-203ENST00000400288 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
SFI1-203ENST00000400288 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
SFI1-203ENST00000400288 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
SFI1-203ENST00000400288 NBR1Q14596 966 aa16.25■□□□□ 0.19
SFI1-203ENST00000400288 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
SFI1-203ENST00000400288 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
SFI1-203ENST00000400288 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
SFI1-203ENST00000400288 RBM19Q9Y4C8 960 aaKnown RBP16.2■□□□□ 0.18
SFI1-203ENST00000400288 CLIP1P30622 1438 aa16.2■□□□□ 0.18
SFI1-203ENST00000400288 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
SFI1-203ENST00000400288 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
SFI1-203ENST00000400288 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
SFI1-203ENST00000400288 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
SFI1-203ENST00000400288 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
SFI1-203ENST00000400288 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
SFI1-203ENST00000400288 SOGA1O94964 1423 aa16.1■□□□□ 0.17
SFI1-203ENST00000400288 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
SFI1-203ENST00000400288 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
SFI1-203ENST00000400288 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
SFI1-203ENST00000400288 EEA1Q15075 1411 aa16.03■□□□□ 0.16
SFI1-203ENST00000400288 EIF5BO60841 1220 aaKnown RBP16.03■□□□□ 0.16
SFI1-203ENST00000400288 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
SFI1-203ENST00000400288 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
SFI1-203ENST00000400288 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
SFI1-203ENST00000400288 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
SFI1-203ENST00000400288 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
SFI1-203ENST00000400288 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
SFI1-203ENST00000400288 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
SFI1-203ENST00000400288 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
SFI1-203ENST00000400288 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
SFI1-203ENST00000400288 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
SFI1-203ENST00000400288 MRS2Q9HD23 443 aa15.93■□□□□ 0.14
SFI1-203ENST00000400288 NACADO15069 1562 aa15.93■□□□□ 0.14
SFI1-203ENST00000400288 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
SFI1-203ENST00000400288 B4GALNT3Q6L9W6 998 aa15.91■□□□□ 0.14
SFI1-203ENST00000400288 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
SFI1-203ENST00000400288 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
SFI1-203ENST00000400288 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
SFI1-203ENST00000400288 NOP58Q9Y2X3 529 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms