RNA–Protein interactions for RNA: ENST00000452250.5

SFI1-212, Transcript of SFI1 centrin binding protein, humanhuman

TSL 2

Gene SFI1, Length 2,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-212ENST00000452250 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
SFI1-212ENST00000452250 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
SFI1-212ENST00000452250 HRCP23327 699 aa24.46■■□□□ 1.51
SFI1-212ENST00000452250 MYT1Q01538 1121 aa24.1■■□□□ 1.45
SFI1-212ENST00000452250 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
SFI1-212ENST00000452250 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
SFI1-212ENST00000452250 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
SFI1-212ENST00000452250 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
SFI1-212ENST00000452250 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
SFI1-212ENST00000452250 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
SFI1-212ENST00000452250 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
SFI1-212ENST00000452250 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
SFI1-212ENST00000452250 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
SFI1-212ENST00000452250 DCAF1Q9Y4B6 1507 aa23.05■■□□□ 1.28
SFI1-212ENST00000452250 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
SFI1-212ENST00000452250 TTBK1Q5TCY1 1321 aaPredicted RBP22.85■■□□□ 1.25
SFI1-212ENST00000452250 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
SFI1-212ENST00000452250 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
SFI1-212ENST00000452250 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
SFI1-212ENST00000452250 NEUROD1Q13562 356 aa22.58■■□□□ 1.21
SFI1-212ENST00000452250 GTF3C3Q9Y5Q9 886 aa22.55■■□□□ 1.2
SFI1-212ENST00000452250 ABCC9O60706 1549 aa22.46■■□□□ 1.19
SFI1-212ENST00000452250 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
SFI1-212ENST00000452250 CENPBP07199 599 aaPredicted RBP22.37■■□□□ 1.17
SFI1-212ENST00000452250 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
SFI1-212ENST00000452250 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
SFI1-212ENST00000452250 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
SFI1-212ENST00000452250 NACADO15069 1562 aa22.07■■□□□ 1.12
SFI1-212ENST00000452250 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
SFI1-212ENST00000452250 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
SFI1-212ENST00000452250 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
SFI1-212ENST00000452250 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
SFI1-212ENST00000452250 PRKCSHP14314 528 aaPredicted RBP21.93■■□□□ 1.1
SFI1-212ENST00000452250 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
SFI1-212ENST00000452250 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
SFI1-212ENST00000452250 ANP32EQ9BTT0 268 aa21.86■■□□□ 1.09
SFI1-212ENST00000452250 WIZO95785 1651 aa21.74■■□□□ 1.07
SFI1-212ENST00000452250 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
SFI1-212ENST00000452250 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
SFI1-212ENST00000452250 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
SFI1-212ENST00000452250 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
SFI1-212ENST00000452250 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
SFI1-212ENST00000452250 CCER1Q8TC90 406 aaPredicted RBP21.56■■□□□ 1.04
SFI1-212ENST00000452250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
SFI1-212ENST00000452250 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
SFI1-212ENST00000452250 TSHZ2Q9NRE2 1034 aa21.42■■□□□ 1.02
SFI1-212ENST00000452250 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
SFI1-212ENST00000452250 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
SFI1-212ENST00000452250 SMARCA4P51532 1647 aa21.39■■□□□ 1.02
SFI1-212ENST00000452250 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
SFI1-212ENST00000452250 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
SFI1-212ENST00000452250 SUPT16HQ9Y5B9 1047 aaKnown RBP21.31■■□□□ 1
SFI1-212ENST00000452250 APLP2Q06481 763 aa21.3■■□□□ 1
SFI1-212ENST00000452250 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
SFI1-212ENST00000452250 ABCC8Q09428 1581 aa21.3■■□□□ 1
SFI1-212ENST00000452250 SMARCA2P51531 1590 aa21.28■■□□□ 1
SFI1-212ENST00000452250 MIER1Q8N108 512 aa21.27■■□□□ 1
SFI1-212ENST00000452250 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.993e-7■■■□□ 16.2
SFI1-212ENST00000452250 SOGA1O94964 1423 aa21.13■□□□□ 0.97
SFI1-212ENST00000452250 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
SFI1-212ENST00000452250 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
SFI1-212ENST00000452250 EEA1Q15075 1411 aa21.02■□□□□ 0.96
SFI1-212ENST00000452250 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
SFI1-212ENST00000452250 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
SFI1-212ENST00000452250 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
SFI1-212ENST00000452250 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
SFI1-212ENST00000452250 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
SFI1-212ENST00000452250 GOLGA3Q08378 1498 aa20.89■□□□□ 0.93
SFI1-212ENST00000452250 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
SFI1-212ENST00000452250 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
SFI1-212ENST00000452250 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
SFI1-212ENST00000452250 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
SFI1-212ENST00000452250 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
SFI1-212ENST00000452250 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.91
SFI1-212ENST00000452250 MYT1LQ9UL68 1186 aa20.73■□□□□ 0.91
SFI1-212ENST00000452250 MSH5O43196 834 aa20.72■□□□□ 0.91
SFI1-212ENST00000452250 KIF21BO75037 1637 aa20.69■□□□□ 0.9
SFI1-212ENST00000452250 CLIP1P30622 1438 aa20.67■□□□□ 0.9
SFI1-212ENST00000452250 BCANQ96GW7 911 aa20.66■□□□□ 0.9
SFI1-212ENST00000452250 RAPGEF2Q9Y4G8 1499 aa20.61■□□□□ 0.89
SFI1-212ENST00000452250 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
SFI1-212ENST00000452250 DEKP35659 375 aaKnown RBP20.58■□□□□ 0.89
SFI1-212ENST00000452250 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
SFI1-212ENST00000452250 FKBP8Q14318 412 aa20.57■□□□□ 0.88
SFI1-212ENST00000452250 FANCIQ9NVI1 1328 aa20.56■□□□□ 0.88
SFI1-212ENST00000452250 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
SFI1-212ENST00000452250 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
SFI1-212ENST00000452250 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
SFI1-212ENST00000452250 UBE2Q2Q8WVN8 375 aa20.51■□□□□ 0.87
SFI1-212ENST00000452250 SALL2Q9Y467 1007 aaPredicted RBP20.5■□□□□ 0.87
SFI1-212ENST00000452250 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
SFI1-212ENST00000452250 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
SFI1-212ENST00000452250 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
SFI1-212ENST00000452250 NEFLP07196 543 aa20.4■□□□□ 0.86
SFI1-212ENST00000452250 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
SFI1-212ENST00000452250 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
SFI1-212ENST00000452250 CUX1P39880 1505 aa20.36■□□□□ 0.85
SFI1-212ENST00000452250 ITGAEP38570 1179 aa20.35■□□□□ 0.85
SFI1-212ENST00000452250 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
SFI1-212ENST00000452250 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms