RNA–Protein interactions for RNA: ENST00000476577.5

SFI1-221, Transcript of SFI1 centrin binding protein, humanhuman

TSL 1 (best)

Gene SFI1, Length 1,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-221ENST00000476577 NISCHQ9Y2I1 1504 aa41.5■■■■■ 4.23
SFI1-221ENST00000476577 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
SFI1-221ENST00000476577 ABCC9O60706 1549 aa36.03■■■■□ 3.36
SFI1-221ENST00000476577 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.15
SFI1-221ENST00000476577 NACADO15069 1562 aa34.72■■■■□ 3.15
SFI1-221ENST00000476577 DCAF8L2P0C7V8 631 aa34.63■■■■□ 3.13
SFI1-221ENST00000476577 ZCCHC6Q5VYS8 1495 aaKnown RBP34.57■■■■□ 3.13
SFI1-221ENST00000476577 MYO15BQ96JP2 1530 aa34.52■■■■□ 3.12
SFI1-221ENST00000476577 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
SFI1-221ENST00000476577 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
SFI1-221ENST00000476577 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
SFI1-221ENST00000476577 BICRAQ9NZM4 1560 aa33.66■■■□□ 2.98
SFI1-221ENST00000476577 PABPN1Q86U42 306 aaKnown RBP eCLIP33.64■■■□□ 2.985e-8■■□□□ 14.5
SFI1-221ENST00000476577 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
SFI1-221ENST00000476577 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
SFI1-221ENST00000476577 EIF4G1Q04637 1599 aaKnown RBP32.78■■■□□ 2.84
SFI1-221ENST00000476577 CC2D2AQ9P2K1 1620 aa32.65■■■□□ 2.82
SFI1-221ENST00000476577 CECR2Q9BXF3 1484 aa32.4■■■□□ 2.78
SFI1-221ENST00000476577 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
SFI1-221ENST00000476577 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.74
SFI1-221ENST00000476577 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
SFI1-221ENST00000476577 ATAD2BQ9ULI0 1458 aa32■■■□□ 2.71
SFI1-221ENST00000476577 NCAPD3P42695 1498 aa32■■■□□ 2.71
SFI1-221ENST00000476577 MROH2BQ7Z745 1585 aa31.96■■■□□ 2.71
SFI1-221ENST00000476577 PEG3Q9GZU2 1588 aa31.92■■■□□ 2.7
SFI1-221ENST00000476577 HMGXB3Q12766 1538 aa31.87■■■□□ 2.69
SFI1-221ENST00000476577 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.68
SFI1-221ENST00000476577 WIZO95785 1651 aa31.66■■■□□ 2.66
SFI1-221ENST00000476577 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
SFI1-221ENST00000476577 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
SFI1-221ENST00000476577 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.58
SFI1-221ENST00000476577 NESP48681 1621 aa31.18■■■□□ 2.58
SFI1-221ENST00000476577 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
SFI1-221ENST00000476577 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
SFI1-221ENST00000476577 PDS5BQ9NTI5 1447 aa30.95■■■□□ 2.55
SFI1-221ENST00000476577 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
SFI1-221ENST00000476577 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
SFI1-221ENST00000476577 CFTRP13569 1480 aa30.88■■■□□ 2.53
SFI1-221ENST00000476577 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
SFI1-221ENST00000476577 CUX2O14529 1486 aa30.78■■■□□ 2.52
SFI1-221ENST00000476577 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
SFI1-221ENST00000476577 THOC2Q8NI27 1593 aaKnown RBP30.76■■■□□ 2.51
SFI1-221ENST00000476577 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
SFI1-221ENST00000476577 CEP164Q9UPV0 1460 aa30.68■■■□□ 2.5
SFI1-221ENST00000476577 MRC2Q9UBG0 1479 aa30.62■■■□□ 2.49
SFI1-221ENST00000476577 WDR62O43379 1518 aa30.53■■■□□ 2.48
SFI1-221ENST00000476577 URB2Q14146 1524 aaKnown RBP30.38■■■□□ 2.45
SFI1-221ENST00000476577 ABCC8Q09428 1581 aa30.27■■■□□ 2.44
SFI1-221ENST00000476577 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
SFI1-221ENST00000476577 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
SFI1-221ENST00000476577 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
SFI1-221ENST00000476577 CUX1P39880 1505 aa29.98■■■□□ 2.39
SFI1-221ENST00000476577 POLA1P09884 1462 aaPredicted RBP29.96■■■□□ 2.39
SFI1-221ENST00000476577 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
SFI1-221ENST00000476577 FGD5Q6ZNL6 1462 aa29.9■■■□□ 2.38
SFI1-221ENST00000476577 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
SFI1-221ENST00000476577 SOGA1O94964 1423 aa29.84■■■□□ 2.37
SFI1-221ENST00000476577 WRNQ14191 1432 aaPredicted RBP eCLIP29.82■■■□□ 2.36
SFI1-221ENST00000476577 RAD54L2Q9Y4B4 1467 aa29.81■■■□□ 2.36
SFI1-221ENST00000476577 BIVM-ERCC5R4GMW8 1640 aa29.8■■■□□ 2.36
SFI1-221ENST00000476577 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
SFI1-221ENST00000476577 TOP2BQ02880 1626 aa29.78■■■□□ 2.36
SFI1-221ENST00000476577 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
SFI1-221ENST00000476577 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
SFI1-221ENST00000476577 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
SFI1-221ENST00000476577 AQRO60306 1485 aaKnown RBP eCLIP29.69■■■□□ 2.34
SFI1-221ENST00000476577 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.34
SFI1-221ENST00000476577 ABCA10Q8WWZ4 1543 aa29.62■■■□□ 2.33
SFI1-221ENST00000476577 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
SFI1-221ENST00000476577 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.31
SFI1-221ENST00000476577 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
SFI1-221ENST00000476577 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
SFI1-221ENST00000476577 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
SFI1-221ENST00000476577 CHD1O14646 1710 aa29.45■■■□□ 2.3
SFI1-221ENST00000476577 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
SFI1-221ENST00000476577 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
SFI1-221ENST00000476577 FBLN2P98095 1184 aa29.34■■■□□ 2.29
SFI1-221ENST00000476577 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
SFI1-221ENST00000476577 ERICH3Q5RHP9 1530 aa29.28■■■□□ 2.28
SFI1-221ENST00000476577 CHMP7Q8WUX9 453 aaPredicted RBP29.28■■■□□ 2.28
SFI1-221ENST00000476577 ADAMTS12P58397 1594 aa29.23■■■□□ 2.27
SFI1-221ENST00000476577 KIF27Q86VH2 1401 aa29.2■■■□□ 2.27
SFI1-221ENST00000476577 FHAD1B1AJZ9 1412 aa29.17■■■□□ 2.26
SFI1-221ENST00000476577 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
SFI1-221ENST00000476577 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
SFI1-221ENST00000476577 CLASP1Q7Z460 1538 aa29.08■■■□□ 2.25
SFI1-221ENST00000476577 CUL7Q14999 1698 aa29.06■■■□□ 2.24
SFI1-221ENST00000476577 IGF1RP08069 1367 aa29.05■■■□□ 2.24
SFI1-221ENST00000476577 RIMBP3CA6NJZ7 1639 aa29.03■■■□□ 2.24
SFI1-221ENST00000476577 RIMBP3BA6NNM3 1639 aa29.03■■■□□ 2.24
SFI1-221ENST00000476577 RIMBP3Q9UFD9 1639 aa29.03■■■□□ 2.24
SFI1-221ENST00000476577 ARHGEF11O15085 1522 aa29■■■□□ 2.23
SFI1-221ENST00000476577 NUP160Q12769 1436 aa28.97■■■□□ 2.23
SFI1-221ENST00000476577 CEP170Q5SW79 1584 aa28.97■■■□□ 2.23
SFI1-221ENST00000476577 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
SFI1-221ENST00000476577 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.21
SFI1-221ENST00000476577 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
SFI1-221ENST00000476577 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
SFI1-221ENST00000476577 ARAP1Q96P48 1450 aa28.74■■■□□ 2.19
SFI1-221ENST00000476577 RAPGEF2Q9Y4G8 1499 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms